| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2411 |
|---|
| Symbol | |
|---|
| ID | 8225983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2975726 |
|---|
| End bp | 2977150 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644930243 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003086794 |
|---|
| Protein GI | 255036173 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3266] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0411768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTC GCCTTCTGAT CTTGCTGAGT GCGCTGATGC TCTGGACCGG TAGCCGCTCC
TTGGGGCAAT CCGAAGAAGA GAAACTCGAC CTTCCCGGCG ATAACCTCAA TTTATATGCG
GTTTTAAAGC TGTTTCGGGA GTCTGAAACG CTGGAAGGTT TTGAGCGAAA ACTCAATGAA
GAAGATTCGG AAATCAACAA CCTCGACCTG GACGGCGACA ATCAGATCGA CTACATCCGC
GTGGAGGACA ATGTGGACGG CAACATGCAC ACGATTACGC TGAAAGTAGC AGTGAGCAAC
ACCGAAGATC AGAACGTGGC GGCATTTTAT GTAGAAAAGA AGGCTGATGG CGAGGTTTGG
ATCCAGCTGG TTGGCGATGA GGATCTGTAT GGAAAAGACT ATATTATCGA ACCCAATGCA
CAATCCGGAG CGGTAGCCGA GACGCCCAAC CCGGGATACA CGGGCGACCG CCAGGTGCAA
CCGGACAGGG TTCAGGAAAA CGTGACCTAT GTTTCCAACT GGCCGGTGAT TCAGTTCATA
TATGTTCCCC GCTATGTGAT CTGGCGTTCG CCGTGGCGCT GGCATTATTA TCCCTCCTAC
TGGCGTCCGT GGCGGCCCCG GTACTGGCAT TACTACTATG GCTATCACTA TCATTGGCAT
TATTACTACA ACGGGCATTT CCGTCGCTGG CCGAGCTACC GCAATCCGGT GTGGCACACG
CACTACTACG GCGGAGACTT CCGGTCTCGG TCGGTGATCG TGCGGACGCG CTACACGCGC
GGAGACTACC GTAAAACATA CACAAAGCCT TCATCGGCAC GACAAGGTTC GGCGCTGTTT
GCAAAACGCT ATCCTCAGGC TCCTACCACT CGCGAACGAT TGCCTAAGTT TGATAAAACC
GGCCGGCCGG TAATGGCCAG GCCTTCGACC GCGCGACCCG GTACTGCGCG ACCCGGATCT
ACGCGACCCG GTACTATGCG ACCCGGTACT ACGCGTCCGT CAGTAGATAG GCCCGGCAAT
GGCAACTCGG GCCGACCAGG CAATGAGCGC CCGGATGCAA CGCGGCCCGG CACTACGCGG
CCGTCCGTGG AAAGGCCTGG CACATCGCGA CCTTCCGAAC CCGGCTCGGA GGTTACACGC
CCGGATATCG AACGCCCGAC GCGGCCTGCG CGACCCGATG TGACGCAGCC GTCTCCGCGA
CCCGAAGTGA CGCGCCCCGC GCCCTCGCCA AGGCCGGAGG TAACCCGCCC GAATGTCGAG
AGGCCGACAC GCCAGGCGCC CGCGGAACGT CCTGCGCCAG CACCACGGCC CACAACGTCA
CAACCAACGC CGTCGGCACG GCCGGCCACA CAGCCTCCGG CCCGGCAGCA GAGCACACCG
CGCTCATCCC GAGAAGGAGA ACGTTCGCAA CCGAGAGGAA ATTAA
|
|---|
| Protein sequence | MKTRLLILLS ALMLWTGSRS LGQSEEEKLD LPGDNLNLYA VLKLFRESET LEGFERKLNE
EDSEINNLDL DGDNQIDYIR VEDNVDGNMH TITLKVAVSN TEDQNVAAFY VEKKADGEVW
IQLVGDEDLY GKDYIIEPNA QSGAVAETPN PGYTGDRQVQ PDRVQENVTY VSNWPVIQFI
YVPRYVIWRS PWRWHYYPSY WRPWRPRYWH YYYGYHYHWH YYYNGHFRRW PSYRNPVWHT
HYYGGDFRSR SVIVRTRYTR GDYRKTYTKP SSARQGSALF AKRYPQAPTT RERLPKFDKT
GRPVMARPST ARPGTARPGS TRPGTMRPGT TRPSVDRPGN GNSGRPGNER PDATRPGTTR
PSVERPGTSR PSEPGSEVTR PDIERPTRPA RPDVTQPSPR PEVTRPAPSP RPEVTRPNVE
RPTRQAPAER PAPAPRPTTS QPTPSARPAT QPPARQQSTP RSSREGERSQ PRGN
|
|---|
| |