Gene Dfer_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2407 
Symbol 
ID8225979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2969798 
End bp2971450 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content46% 
IMG OID644930239 
Producthypothetical protein 
Protein accessionYP_003086790 
Protein GI255036169 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.147605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTA TTCTATCTTG CCTTATTGGC GCGCTTCTCC TTTGCTCGGT TGCAATTCAT 
GCGCAACAGT TTTCTCCGAC TACCGGCGTG CCGTGCCCTA ATTGTGTGCC GACCAATTAC
AATGCCATTG GTACGCCGTT TATATCGGAT ATCTACAATC CAGGTATTGA TGTTACAAAA
CTTGATTACC AATGGTACAT TTATATGGGA GTGCTGGATG TTCCTCCATC CACCTATTCT
CAGGGTCTAC CTGATGGAGC TGGTAAGAAT TCGTTCGTTT CACTTAAGAC TTCTGAAGGA
GCAGTGAACG ACAAACTTTA TGTGGATGTA AGTGGGTTCG ATGTTAACAA AACCTACGTA
TTCAGATATA GCGTATGTGC AGCTAATGTT TACGATGGTG GTAACACTGA TGAGATAATT
TATGCGGAAT CTGCTAAGAT GGAAATTGTA ACTGTCGGTC AAAATCCCGA TATTTTAGTA
AAGTCGCAAA CAACTGATTT CCCCGATGCA CAGAGCCAAC AGCATTGGAC AACGAGAGTT
ATAAGTTTTA AACCATTGTC CCCCACGCTT CGATTCAGGA TGTCGGGCAA AACACCTGGC
AGTACACCCG GCTACGTACA TTTCAGCATC GACAAATATC CCTTCGATTG TACACCAAGC
GCTCAGGTTT CCATAGGCAC CCCGTCGCCG ATCAATACAC CTTTTCCTTC TGATAAGTTG
AATTTGAACG CAGTGACAAT CAACAGCACA CCTCCGCAGA ACTATGAGCT TGTATGGAAA
TCCGGACCTA ACTCTACCGA TCCAAGCTTG ACGCCGGAAG AGGTAGCGAA AGCGCCCATT
TCGAATGCAA CGGCAACCTT GAAGCCTTAC TATGCATTCT ATTATGCCAA AGATCTTAAT
TGTTACAACG TACCGACATC TACGGCTGAA ATGAAGTTTA TGCATCAGCC AACGCATGTT
TCGCTCAAAG CGACAAACGT AACAATTTCG TGCCCGGCTA CTACGACTGA CCTAACGCTG
CTGGAAAATC CCGGAATGCA GGTGCGTTGG TATAACAATG ATACGCATTC GGGATTATCG
GTCCCTGACC CCAAAGCCGC CCCTCCCGGC GATTACTATG CTTTTTATTA TGACTTTCTT
GAAGGGACAT GGTCTCTTTT GCCAGGTCAG GCGACGACTT CGAAGGTGCA TGTAGAAAAC
GCTGTCAATG CTGGCATCCC CAACCTCGGC CCTACCATGA GTATCAACTC CTTGACCTTC
GCCCCAAACG CAAGCAGGGA CTTCGTCGTC AGGATACACA ACATTAAGGC GGAGGATAGC
AATTGTTCGG TTTATTTTAT GGTTTCCAAG ATGCCGGGTT TTACGATTTC GTATAATCCC
GGAGCCGGGC AGTCGGATGT TGATGGCGGG ATTTTTAACA ATAATGATTT CTGGACTTTC
ACGGAAGATA ATGGTTTTAT CAAAGTTACT TCCAAGTATG GCATTGCGGC CAATGGCTAT
TCCGATATCG GTTTTAAGGT AACACGCAAC AGCGGGACGC CGGCCAACAC TACGCAAAGC
GTATCCATCA TTATTCCTGC CGCAGGTGGA GGCGGAGAGC AGATCACGAC CAACAACACG
ATAATTACAT CTCTCAGTAG CGGGATTAAC TAG
 
Protein sequence
MKSILSCLIG ALLLCSVAIH AQQFSPTTGV PCPNCVPTNY NAIGTPFISD IYNPGIDVTK 
LDYQWYIYMG VLDVPPSTYS QGLPDGAGKN SFVSLKTSEG AVNDKLYVDV SGFDVNKTYV
FRYSVCAANV YDGGNTDEII YAESAKMEIV TVGQNPDILV KSQTTDFPDA QSQQHWTTRV
ISFKPLSPTL RFRMSGKTPG STPGYVHFSI DKYPFDCTPS AQVSIGTPSP INTPFPSDKL
NLNAVTINST PPQNYELVWK SGPNSTDPSL TPEEVAKAPI SNATATLKPY YAFYYAKDLN
CYNVPTSTAE MKFMHQPTHV SLKATNVTIS CPATTTDLTL LENPGMQVRW YNNDTHSGLS
VPDPKAAPPG DYYAFYYDFL EGTWSLLPGQ ATTSKVHVEN AVNAGIPNLG PTMSINSLTF
APNASRDFVV RIHNIKAEDS NCSVYFMVSK MPGFTISYNP GAGQSDVDGG IFNNNDFWTF
TEDNGFIKVT SKYGIAANGY SDIGFKVTRN SGTPANTTQS VSIIIPAAGG GGEQITTNNT
IITSLSSGIN