| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2402 |
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| Symbol | |
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| ID | 8225974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2961247 |
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| End bp | 2964900 |
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| Gene Length | 3654 bp |
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| Protein Length | 1217 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930234 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086785 |
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| Protein GI | 255036164 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTATC CAACAGTGCC TAACCATCAG ACAATCAAAA TTATGCAAAA AACAGTACGT
AACAAGCCCG TCGACTGGCG AAAAATTATG CGCATTGGAC TGCTTCAATG GATTCTTGCC
GTCTCGCTCG CAGCCGGCAG TTATGCGAAG GAAACTGCGG CCCAGTCTGT GCTTAGCAAG
GATCTGACGC TCACGCTTCG CAATGTTTCG CTTAAACAGG CCCTGAACGA GATCCAGGCC
CGTGCCAATA CCCGCTTCGT GTACAGCAGC CGGGTTTCCG TGAAGGAGAA CGTCAGCATT
GAGGTAAAAA ACCAGAAGCT TTCCAAAGTG CTGGACCAGC TGCTGGCGCC TCGTGGAATT
AATTACAAAC TCATCAACAA CCAGATCGTA CTCGCCCGGA CGCGCGTCAG CCGCGAGGAA
TCCGTAATCC CCGAATTGGA AGAGAAGTTG CAGCAATACG TGCTGCCCAC CGAAATCCAG
GTGCGCGGGA CCGTGAGCTC GTCCGACGGC CAGGGCACGC TGCCCGGTGT GAGCATTGTC
GTGAAGGGAA CGTCGCAGGG TACCACCACG GACGGCGACG GAAAGTTTGA GATCACGGTG
CCGAATGTGG AATCGGCGCT GGTTTTCAGC TTTGTGGGTT ATGTTCCGCA GGAAATCGTG
GTGGGTACCC GCACCGAAGT GAATGTGACT TTACAGGCGG ATAACAAGGC GCTGTCGGAA
CTGGTGGTGG TGGGTTATGG CACGCAGAAA CGCGTGAACC TGACCGGCGC CGTGTCGCAG
GTCCAATCCA AAGACCTGGA AAACAGGCCT TTGAACAACA TGTCGCAGAT CCTCCAAGGT
ATGGTACCTA ACCTGAACAT TACATTCAGC ACGGGCCAGC CGGGCAAGGG AGGCGCATTG
AATGTACGCG GAGAAACTTC GGTAAACGGC GGTGCGCCGC TCGTGCTGAT CGACGGTATC
CCGGGCGATA TAAACCGCAT TAACCCGGGC GACGTGGAAT CGGTATCGGT ACTGAAAGAT
GCCGCGGCAT CGGCCATTTA CGGTGCGCGT GGTGCATTCG GGGTGATTTT GGTGACTACC
AAAACTGCCA AAAACGGCAA AACAACCGTG TCGTACAGCA ACAACTTCGG CTGGTCGAAA
CCGACGATCA ATACCGATTT CATGACCAAT GGCTATGATT ATGTAAAAAT CAACGATGAT
GCGTTCATCC GCGCAACGGG GAACAGCTAT ACCCGCTATT CCGAGGAAGA TTATGCGGAA
ATTGAAGCGC GCCGGTACGA TAAAACCGAA AACCCGGCCC GTCCGTGGGT GGTGGTGAAG
AATGTGAATG GCAAGGACAT TTACAATTAT TATGGCAACT ACGACTGGTG GAACACGATT
TTCAACATGA GCCAGCCCTC GCGCCAGCAT AACCTGAACC TCTCCGGCGG CACGGACAAG
ATCAACTACT TTCTGTCAGG CTCCGTGTTT GAGAAGGACG GGATCATGCG GATCAATACC
GATAAATTCA CATCCTACAC GCTTCGCAGC AAGATCAACG CCCAGCTTAC GCCCTGGTTG
AAGGTGAGCA ACAATACCCA GTATTTTGAT TCAAAATACA AATATCCGGG CCTGGAAGGC
GGCGCCAACT CCAACTTCGT AGCCATTACC GTGCACGCTT TGCCCATTTA CGCACCGCGT
AACCCCGACG GCACGCCGAC TTACAATACA TTGAAAAACA ACTATTCGAT CGGCGACGGG
CTATTCGCCA ACCTGCTCAA AGGCATTGCC GGCGGTGAGC AAAAAGTGCA TGAGTTGACG
ACGATCAACA CGGTTGAAAT GAATCTGGCC AAAAACTGGA ACCTCACCGC GAACCACTCC
TACTCATTCT ACATTACCGA CGACTGGTAC CGCTCCGCCG TGGCTACTTA TTCGATCCAG
CCGGGCATTC TCACGACCGT TCCGAACTAC AACACCGATC AGTTGAAGAA AACTTTCTGG
TTCGATCCGC AGAATGTCGT GAACGTGTTC TCGTCGTTCA ACCATACGAT GGGCAAGCAT
TACTTCGGCG CAACGGCGGG TATCAACTAC GAATCGCGCA AACATCAGGT GCTGGCGGGC
TCGCGTAAAA ACCTGCTGTC CGAGAGTATT AACGACCTCA ACCTTGGTAC CGGCGAGCAG
CTTTCGGGCG GTGGTGCGTA CCAGTATGAG CTCTTCGGCG CGTTTTTCCG TGCGAACTAT
GATTACCAGG GCAAATATCT GCTCGAAGTG AATGGCCGCT ACGACGGTAC TTCTCGTTTC
GGTGGCGGAA AACGCTATGG TTTCTTCCCT TCGGTGTCGG CGGGATGGCG TTTGAGCGAG
GAGAATTTCT TCGAATCAGC GCGAAATGTG GTGAACAACC TGAAAATCCG TGCTTCTTAC
GGAACGCTGG GTAACCAGCT GCCTCCGAAG TTCAACGACA ACCCGAGCTC AGCAAGCTTC
TATCCTTACG TTCCGATGAT GCCTACGGCG CAGTCGAACT GGATTACCAA TGGCCAGAAA
CTGCAATATG TGAGCAGCCC GGCACCTATT TCGTCCGGCC TCACGTGGGA ATCAGCCACG
ACGTCCAACA TCGGTCTGGA CGCCACCTTA CTGAAAAACC GCCTGAACCT ATCGTTCGAC
GGCTACATCC GCAACACGAC CGACATGCTC ATTCCCGGGC AGGTGCTGCC ATCGGTGTAC
GGCGCCACCG TTCCTACCCA GAATGCGGGC GATCTGCAAA CGAAAGGTTT CGAGCTATCC
ATCGCGTGGG CTGATATGTT CAAACTGGCC GGCAAAGCGC TCACCTACAA TGTGTCCTTC
ATTGTTTCGG ACTCCAAATC GAAAATCACC AAATACGATA ACCCGAACAA AGTGCTTTCC
AGTCCTTACG TAGGCCAGAC GATCGGTGAA ATGTGGGGTT ACTCGATTGA CGGCATGTTC
CAGAGCAATG AGGAAGCGCA GGCTTACAAG ATCGATCAGA CATTCGTGAA CAGACAGCGC
CTGAGCGCGC CGGGAGAATG GAGCAAGCTG CAAGCAGGCG ACCTCCGGTT CCTCGACCTC
AACGGCGACG GCAAGATCAA CAACGGCGCC AACACGCTGA GCGACCCGGG CGATTTGAAA
ATCGTGGGTA ACAACCGCGT TCGATTCCGC TACGGCCTGA ACCTCGGCGC GTCCTGGAAT
GGATTCGATA TTTCGGCACT CGCACAGGGT ATTCTTCGCA GGAACTGGTA CCCAGGCAAC
AATGCCGATA AATTCTGGGG GCCCTATTCA AGACCCTACT ATTCATTTAT CCCCAAAGAT
TTCGGCGACG ACGTGTGGAC GCCCGAAAAC CGCGATGCCT ATTTCCCGGT ATTGCGCGGC
TACACGGCAC TCAACGACGG TGGCGACCTG CGGGCTGTCA ACGACCGTTA CATTCAGAAC
GTGGGTTACC TGCGCCTGAA AAACGTCGTG ATCGGTTACA CTGTGCCTGA GCGCATCAGC
AAGATGATCC GCGTTCCGAG AGCGAGGATT TATATCAGCG GCGAAAACCT GCTGACCTAC
ACCCCGCTCC GCTCGAAATA CATCGACCCC GAGCAGTTCG ATGGCGACGG CACCAATGGT
CGTACTTATC CATTGTCCAA AACCATTTCA GCCGGTCTTA ACCTCACATT CTAA
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| Protein sequence | MFYPTVPNHQ TIKIMQKTVR NKPVDWRKIM RIGLLQWILA VSLAAGSYAK ETAAQSVLSK
DLTLTLRNVS LKQALNEIQA RANTRFVYSS RVSVKENVSI EVKNQKLSKV LDQLLAPRGI
NYKLINNQIV LARTRVSREE SVIPELEEKL QQYVLPTEIQ VRGTVSSSDG QGTLPGVSIV
VKGTSQGTTT DGDGKFEITV PNVESALVFS FVGYVPQEIV VGTRTEVNVT LQADNKALSE
LVVVGYGTQK RVNLTGAVSQ VQSKDLENRP LNNMSQILQG MVPNLNITFS TGQPGKGGAL
NVRGETSVNG GAPLVLIDGI PGDINRINPG DVESVSVLKD AAASAIYGAR GAFGVILVTT
KTAKNGKTTV SYSNNFGWSK PTINTDFMTN GYDYVKINDD AFIRATGNSY TRYSEEDYAE
IEARRYDKTE NPARPWVVVK NVNGKDIYNY YGNYDWWNTI FNMSQPSRQH NLNLSGGTDK
INYFLSGSVF EKDGIMRINT DKFTSYTLRS KINAQLTPWL KVSNNTQYFD SKYKYPGLEG
GANSNFVAIT VHALPIYAPR NPDGTPTYNT LKNNYSIGDG LFANLLKGIA GGEQKVHELT
TINTVEMNLA KNWNLTANHS YSFYITDDWY RSAVATYSIQ PGILTTVPNY NTDQLKKTFW
FDPQNVVNVF SSFNHTMGKH YFGATAGINY ESRKHQVLAG SRKNLLSESI NDLNLGTGEQ
LSGGGAYQYE LFGAFFRANY DYQGKYLLEV NGRYDGTSRF GGGKRYGFFP SVSAGWRLSE
ENFFESARNV VNNLKIRASY GTLGNQLPPK FNDNPSSASF YPYVPMMPTA QSNWITNGQK
LQYVSSPAPI SSGLTWESAT TSNIGLDATL LKNRLNLSFD GYIRNTTDML IPGQVLPSVY
GATVPTQNAG DLQTKGFELS IAWADMFKLA GKALTYNVSF IVSDSKSKIT KYDNPNKVLS
SPYVGQTIGE MWGYSIDGMF QSNEEAQAYK IDQTFVNRQR LSAPGEWSKL QAGDLRFLDL
NGDGKINNGA NTLSDPGDLK IVGNNRVRFR YGLNLGASWN GFDISALAQG ILRRNWYPGN
NADKFWGPYS RPYYSFIPKD FGDDVWTPEN RDAYFPVLRG YTALNDGGDL RAVNDRYIQN
VGYLRLKNVV IGYTVPERIS KMIRVPRARI YISGENLLTY TPLRSKYIDP EQFDGDGTNG
RTYPLSKTIS AGLNLTF
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