Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2398 |
Symbol | |
ID | 8225970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2956318 |
End bp | 2957982 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644930230 |
Product | ribulokinase |
Protein accession | YP_003086781 |
Protein GI | 255036160 |
COG category | [C] Energy production and conversion |
COG ID | [COG1069] Ribulose kinase |
TIGRFAM ID | [TIGR01234] L-ribulokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGAGA ACTACGTCAT TGGTATCGAC TTCGGTACCG ATTCTGTGCG GGCATTAGTC GTAAATGCGA ATACGGGAGA GCAGGCCGGG ACGGCCGTGC AGGAATATCC GCGCTGGAAG CAGGGCAAGT ATTGCGATGC GGGCAGCTCG CAGTTCCGGC AACATCCGCT CGATTATCTG GAAAGTATGG AAAGCGCCGT TCGCGGAGCA TTGGACCAGG CGCCGGCCGC CGTTCGGCAG CAGGTGCGCG GTATTTCGGT GGATACTACC GGTTCCACAC CCGTGGCCGT CGACAGGCAG GGCACGCCGC TGGCGCTGTT GCCCGAGTTT GCCGAAAATC CGAATGGGAT GTTTATCCTT TGGAAAGACC ACACGGCCAA TGCCGAAGCA GAGGAGATTA ACCGGCTGGC GCATCGTTAT GACATTGATT TTACAAAATA TGTAGGCGGG ATCTATTCCT CGGAATGGTT CTGGGCCAAA ATCCTGCGCA CGTTACGTGT GGACACGGCC GTGCGCGAGC AAGCCTTCTC ATGGGTAGAG CATTGCGACT GGATTTCTGC CGAGCTCACG GGCATGACCG ATCCGCTCCA ACTGAAACGT TCGCGCTGCG CCGCAGGGCA CAAAGCGCTC TGGCACCAGG ATTTCGACGG GTTACCGTCC AATGCATTCT TCACCGAGCT CGACCCATTG CTCGACGGTC TCCGCGACCG CCTTTTCAGC ACCACCGAAA CTTCCGACCA ACCGATGGGC ACCATTTCAA AAGAATGGGC GGCAAAGCTG GGCATTCCCG AAAACGTCGT GATCGGCGTA GGGGCGTTTG ATGCGCACAT GGGCGCGGTA GGGGCGCTGA TCGAGCCGTA TTCGTTGTGC AAGGTGATCG GTACTTCCAC CTGCGACATG CTCGTGGCAC CGAACGAGGA AGTCGGGCAT TTGCTCATCA AGGGCATTTG CGGGCAGGTG GATGGCTCCA TCGTGCCGGG TATGCTCGGT ATGGAGGCAG GGCAGTCGGC GTTTGGTGAC ATTTATGCCT GGTTTTCCAA ACTGATCATC GAGCCTGTAC GCACATTGCT CGGCGAGGAG GAAGCGGCTG AACTATCGAA AAAGCTGATC CCGCACCTGG CCGAACAAGC GGCGAAGTTG CCAGTTACCG AAAAAGACAT CATCGCCATC GACTGGCTGA ACGGCCGCCG CACCCCCGAC GCAAAACATA CGCTCAAAGG CGGACTGCTC GGCCTGAACC TCGCCAGCGA CAGCCCAAGG ATTTTCAAGG CATTGGTAGA AGCTACCGCT TATGGCTCCA AAGCGATCGT CGAGCGGTTC CGCAGCGAAG GTGTGCCTAT TCACCAGGTA ATCGCGATTG GCGGCGTGGC GAAGAAGTCG GCATTTGTGA TGCAAACGCT GGCCGACGTG CTCAATATGC CTATTAAAGT GGCCACCTCC GAGCAGGCTT GTGCATTGGG AGCGGCCATG TTCGCTTCGG TGGCGGCAGG CGTACACGCC AATTTGCAGG AAGCGCAGGA GGCCATGAGC TCCGGTTTCG ACGCAGTGTA TGAGCCGCGC GAGGCCCAGT CGGCCATTTA CCAGCAGCTT TATCAGAAAT ACCTCGAAGC GGGGGCTTAT ATCGAAAATG AATTTTTACA AAAAGCATAT TTAGAACTTA CCTGA
|
Protein sequence | MEENYVIGID FGTDSVRALV VNANTGEQAG TAVQEYPRWK QGKYCDAGSS QFRQHPLDYL ESMESAVRGA LDQAPAAVRQ QVRGISVDTT GSTPVAVDRQ GTPLALLPEF AENPNGMFIL WKDHTANAEA EEINRLAHRY DIDFTKYVGG IYSSEWFWAK ILRTLRVDTA VREQAFSWVE HCDWISAELT GMTDPLQLKR SRCAAGHKAL WHQDFDGLPS NAFFTELDPL LDGLRDRLFS TTETSDQPMG TISKEWAAKL GIPENVVIGV GAFDAHMGAV GALIEPYSLC KVIGTSTCDM LVAPNEEVGH LLIKGICGQV DGSIVPGMLG MEAGQSAFGD IYAWFSKLII EPVRTLLGEE EAAELSKKLI PHLAEQAAKL PVTEKDIIAI DWLNGRRTPD AKHTLKGGLL GLNLASDSPR IFKALVEATA YGSKAIVERF RSEGVPIHQV IAIGGVAKKS AFVMQTLADV LNMPIKVATS EQACALGAAM FASVAAGVHA NLQEAQEAMS SGFDAVYEPR EAQSAIYQQL YQKYLEAGAY IENEFLQKAY LELT
|
| |