Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2391 |
Symbol | |
ID | 8225963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 2949572 |
End bp | 2951752 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644930223 |
Product | Diverse 7TM receptor transmembrane region |
Protein accession | YP_003086774 |
Protein GI | 255036153 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTAA AGTTCTACCG CGGGATTATT GGAACATTCC TCTTGCTCAT AAGTGCTCTG CAATGCGCTT GTGCCGGTGA GGTCGTGTTC AAAGGGGACG ATGTGACGAT CGGCAAGCAG GTTGAAATCC TGGAAGACAC GACCTCCGCC ATGACGATCG ACGACGTGAC CGCCCGGGGG ATATTTACGC CCAGCACCGA AGAAACGCCC AATTTCGGGG TGAGCGCATC CACATTCTGG ATACGCCTCA ATATTCGCAA CACGAGCGCG GAGGACAATA TTTTCCTCGA ACTCGCCTAT CCGCGTATCG AATCCGTTAC GCTGTATTCG TCCGGCGAGG GCAATCCCAA AAAAGAGACC ATTTCATGGA ACGATGCTTT CGACAAACGG CGCGTCAAGC ACCAGAACAT CGTTTTTAAA CTCAATATTC CCCGGCAAAG CGCGCAAACC TTCTATTTGC AAGTTCACGG AAGCGAGCAG ATCGTCGTTC CGCTTATCGT GCGCAGCGAG ATGAACTTTT TTCAGTTTGC GCTGACCAAC GAGATCATTT CCGGAATCCA TATCGGCGTG CTTTTCGTGA TGATGCTGTA CAATTTCTTC GTGTACTTCT CCATCCGTGA AAAAAGCTAT CTGTATTATG TGCTTTACAT TCTCTTTATC GGGCTCACGC AGACGACGAT TACCGGTTAC ACATTCAAGT TCCTCTGGCC CGATACGCCC GCATTCAACG AATATTCCAT CATCCTTTTC CCCGCGCTGG CCGGCACTTT CGCATTGATG TTCTTCCAGA ACTTCCTGCA TATCCGTGAG CGATCGACGG CCACTTACCG CATTATCACG GTCATTATCG TTACTTACGG CGTGGCTGTG TTATTTAACC TGATCGGACT GAATATGGTC AGCTACCGGA TCATCGACGT GCTGGCGCCG TCTGCGGCGC TGTTTGCGCT CATTGTGGCT GTAATGCTGT CGATGGAAGG TTACCGCCCG GCAAAGTTCT TCCTTGTAGC GTGGTCGATG TTCCTGATCG GCATTGTACT GTACTCGCTG CGCAACCTGA ACATTTTGCC TTATAATACC TTTACAAACT ATACCATGCA GGCCGGCACG GCGATCGAGG TGATCCTCCT ATCGTTTGCC CTGGCCGACA AGATCAACAT TTTCAAAAAA GAGAAAGAAA TTTCCCAGGC ACAGGCGCTG CGCATTTCGA TGGAAAACGA GAAGATTATC CTCGAACAGA ATGCCTTCCT CGAAAAGAGC GTAAACGAAC GCACGGCCGA GTTGCAATTT GCCAATACCG AGCTCAACCT CACACTCACG AAGCTGAAAG ACGCCCAGAC GCAGCTGATC GACTCGGAGA AAATGGCATC GCTGGGTCAG CTTACGGCGG GCATCGCGCA CGAGATCAAC AACCCGATCA ACTTCGTAAG CTCCAACATC CGGCCGCTGC GGCGTGATAT CGACGACGTG CTCGAAATCC TCGATTCGTA CGACGGCATC CGGGAGGTCA ACTCGGTGGA AACCCTGCAA AGCAAGGTAA GGGAAATCGA ACAGCTGAAA TCCGATCTGG ACCTGGATTA TCTCAAAACC GAGCTCAATA CGCTACTCAA AGGCATGGAA GACGGGGCCC ACCGCACGGT AGAGATCGTG AAAGGCCTGA AAATATTCTC GCGTGTGGAC GAAACCGACC TCAACCTGGT CAATATCAAT GAGGGAATCG AATCCACACT CATTATCCTC AATTACCAGA TGGGCAACTC CATCACCCTC GTGAAGGAAC TGGGCAACAT TCCGAGCATC GAATGCTATG CCGGAAAGCT CAACCAGGTG TTCATGAATA TCCTGACCAA CTCGATTTAT GCTTTGCAGA AGGATAAACA AGAGGGTAAA ACGCCGACTA TCTGGGTAAA ATCCTGGCTG AAAGACCCTG AAACCGTGGC TATTTCGATG CGGGACAACG GGCCGGGCAT GACGCCGGAG GTGCGCGCGA AGATTTTCGA GCCGTTCTTC ACCACCAAAC AAGTGGGCGA CGGTACCGGC CTGGGGCTTT CAATTGTGTT TAAAATTATC GAAGTTCACA GCGGTAACAT CCACGTGAAC ACCGAAGTAG GAGAAGGAAC AGAATTTTTG ATCACGCTGC CTGTAAAAAG AAAAGCACGC CCAATCCCTG ATTTTCAATG A
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Protein sequence | MDVKFYRGII GTFLLLISAL QCACAGEVVF KGDDVTIGKQ VEILEDTTSA MTIDDVTARG IFTPSTEETP NFGVSASTFW IRLNIRNTSA EDNIFLELAY PRIESVTLYS SGEGNPKKET ISWNDAFDKR RVKHQNIVFK LNIPRQSAQT FYLQVHGSEQ IVVPLIVRSE MNFFQFALTN EIISGIHIGV LFVMMLYNFF VYFSIREKSY LYYVLYILFI GLTQTTITGY TFKFLWPDTP AFNEYSIILF PALAGTFALM FFQNFLHIRE RSTATYRIIT VIIVTYGVAV LFNLIGLNMV SYRIIDVLAP SAALFALIVA VMLSMEGYRP AKFFLVAWSM FLIGIVLYSL RNLNILPYNT FTNYTMQAGT AIEVILLSFA LADKINIFKK EKEISQAQAL RISMENEKII LEQNAFLEKS VNERTAELQF ANTELNLTLT KLKDAQTQLI DSEKMASLGQ LTAGIAHEIN NPINFVSSNI RPLRRDIDDV LEILDSYDGI REVNSVETLQ SKVREIEQLK SDLDLDYLKT ELNTLLKGME DGAHRTVEIV KGLKIFSRVD ETDLNLVNIN EGIESTLIIL NYQMGNSITL VKELGNIPSI ECYAGKLNQV FMNILTNSIY ALQKDKQEGK TPTIWVKSWL KDPETVAISM RDNGPGMTPE VRAKIFEPFF TTKQVGDGTG LGLSIVFKII EVHSGNIHVN TEVGEGTEFL ITLPVKRKAR PIPDFQ
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