Gene Dfer_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2380 
Symbol 
ID8225952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2939850 
End bp2940365 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content53% 
IMG OID644930212 
Productphosphodiesterase, MJ0936 family 
Protein accessionYP_003086763 
Protein GI255036142 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.871136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTA TCGGAGTATT ATCAGACACA CACGGCTATC TTGACGAGCG TATTTTCGAT 
CATTTTGCCA ATTGTGACGA GATATGGCAC GCGGGTGATA TCGGTTCGGT GGAGATCATC
GGGCAGTTGC AGGCTTTCAA ACCTACCCGC ATTGTTTACG GCAATATTGA TACGCCCCAG
GTGCGTGCGC TCACGCACGA GAACCTGCAT TTCGAAGTAG AGGGTTTCAG GGTCTGGATC
ACGCACATAG GCGGCGCACC GCCGCGCTAC AACCCGCAGG TCATGCCCGT TTTAAAGTCG
AACACACCCG ACATTTTCGT ATGCGGGCAT TCCCACATCC TCCGCGTAAT CCGCGACAAG
GCATTAAATA ACATGCTGTA CATAAACCCC GGCGCCGCCG GCCGCGAAGG CTTCCACAAA
TTCCGGACAC TACTCCGTTT CAACCTCCAC GAAGGACTCA TCAGCCAGAT GGAGGCGATT
GAGCTGGGGA AGCGAGGGGT GGTGTACAAT GATTGA
 
Protein sequence
MKSIGVLSDT HGYLDERIFD HFANCDEIWH AGDIGSVEII GQLQAFKPTR IVYGNIDTPQ 
VRALTHENLH FEVEGFRVWI THIGGAPPRY NPQVMPVLKS NTPDIFVCGH SHILRVIRDK
ALNNMLYINP GAAGREGFHK FRTLLRFNLH EGLISQMEAI ELGKRGVVYN D