Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2379 |
Symbol | |
ID | 8225951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2936769 |
End bp | 2939534 |
Gene Length | 2766 bp |
Protein Length | 921 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644930211 |
Product | hypothetical protein |
Protein accession | YP_003086762 |
Protein GI | 255036141 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTTG CGCACGCGCA AACCGGGGGG CGATTCACGC TGAAAGGAAC CGTTACCGAC ACTTCCGGCA CAGCGCTCCC CGAAGCGACC ATCATGTTAC TGCTCCCCAA AGATTCTTCA CTCGTCAACT TCGGCAGAAC GGCCAAAGAC GGGACTTTTG AAATGAAAAA CCTGAGACGT ACCACCTATA TTTTCAAAGT GTCGTACGTG GGTTATGTGC CTTATCAGGA GATTGTCGAT CCTAAAAATC AGGAAGTTGT GGATCTTGGT AAAGCCAAAA TGAAGGTTTT GCAAAAAGAA CTGTACGAAG TCGTGATCAA AACGGCCCGG GCGCCGCTGA GCATCCGGGG CGATACGGTG GAGTTTGATG CCAAGGCATT TAAAGTACCG CCGGGATCGA GTGTGGAAGA CCTGCTGCGC AAGCTTCCGG GTGTGCAGGT GGATGGCGAC GGGAACATTC GTGCGCAGGG TGAAGAGATT AAACGTGTAA CGGTGGACGG TAAGCGCTTC TTCGGCGACG ATCCCAAAAT GGCCACCAAA AACCTGCCCG CCGAGGCGAT CAACAAGGTG CAGGTCTTTA ACGGGAAAAC CGAGCAGGCC AAAGCTACCG GCGTGGACGA CGGCAAGCGC GAAAAAACGC TGAACCTGGA ATTGAAGGAC AGCCATAAAA AAGGCGGTTT CGGAAAGGCA GTTGCGGGCG TCGGGACGGA TTCGCGGATG GAAGGGAAGG TGAGCTACAA CCGCTTCGAT GAGAAGCAGC AGTTTGCATT GCTTGGTTTC GGGAATAATA CCAACCAGTC GGGCATTGCG CGTAACGATT ACCAGGATTT CAAAGGCAGC CAGTCGTTCA ACTGGGGCGA CGACGGGGAT TTCGGATTCA GCAGCGGCCG GTACTACGGC GGCGACGATA TCACGATCCA GCCCAACTGG GGCGGTCAGG GCTCGGAAGG GTTTACCAAA AACTGGGCTG GCGGCGCCAA TTACAACTTC GATACGAAGA AGACAAAGCT GAGCACCAGC TATTTCTATA ATTCCACACG TGCCATTACG GACGTGCAAA CCAGCTCCGA GAACTTCCTC ACCAACGATT CCTACCTCAC CGACGGTAAA AACAAAACGA TTGCATTTAC CGGCAACCAT CGCCCGGCAT TCCGTTTCGA GCACAATATC GATTCGCTCA ACACCATTAT CCTGATCAGC AACTCGCGGA TCAATGGCGG CGATAATGAG TATACCGCCG AGCAGCGCTC GTACCGCAAT GAGAGCATGC TCACCAACCA GTCGACCGTG AACAACCTGA GCGATTACAA CTCGTTTGCA ATGGCGAACC TGCTGCTCTA CCGTCACAAA TTCAAGAAAA AAGGTCGGAA CTTCGCCGCC AGCGTAGGTT ATAACATTAA CAATTCGGAT GAAGACCGGC ATCAGAATTC GGTGAACCTC TTCTTGCAGG ATTCTACGAA AAACAGCGTG ATCAACCAGT TGCAGCAAAC CGAAAGCACC CGCGGCAACT TCAAGGGAAG CCTGTCGTTC GTGGAGCCAT TTGCGAAGAA GTTTTTCTGG GAAACCTTTT ACAATTACAG CACGCGGAAG GACAAGGTGG ACCGCGACGT GTTCGACGTG GAAGGCAATG TGGACAAAGT GAACCCCTTC CTGACCCGGT ACTACACCAA CGACTTCTCC TACAACCGCC TCGGAACGAG TGTTCGCTAC TCGCACAAGG GCCTGAATCT CGCTATGGGA CTTGCAGGTG TGCAGTTTGA CCTCCGCGGT AAGTTCGCGC TCGACGAATC GCAGCAGGAT ATGACGCGCG TAGACCGTAC ATTCAAAAAG TTGGTACCGA ATGTGTCTTT GAATTACAGT CTGAAAAACA ACAAATACGT GTATGCGGAA TACGGCCTGA ACGTGCGCGA GCCATCCATT ACCGACTTGC AGCCGATCGT GGACAACAGC AACCCGCTCT ACATCGTGGA AGGTAACCCC GACCTGATCC CGCAAACTAC CCATAATGCC TACGCGGGTT TCAACATGTT CAATCCGGCG AGCTTTACCA ACCTTTATGT GAATGCCTAT TATAATTACA ACGAGGACCA GATCGTGTAC AACCGCACCA TCAGCGAAGA CCTCGTGACC ACCACCAAGC CGATGAACAT CAGCGGCGGG AACAATTACG GCAGCTACAT TGGGTTCGGG TTTCCGTTGA AGAAAACAAA AGCGACGTTT GGAGTGAACA CGGGGATTAA TTTTAGCAAC AACCTGACTT ATATCAATAA TGTCAAAAAC GAGACGAAGA CGGACGGATA TAACTTCGGC GCACGGCTGG ACCTGACCCC GAGCGATGTG TTTACGCTTT ATACCAATGC AAACTGGAAT ATCAGCGACA CCAAATACTC GATTAACACA AGCCAGAACC AGAAGATCGT CAATGCGACC TACAATGCTG AAATGAACAT TAAAATGCCG AAGGAAATCT ATTTCAGCGG CCGGCTGAAC TACCGGAGCT ATAAAAACGA CCAATTCGGT TTCAACCAGC AGGTGCCGAT CCTGAACCTC TCGGTGTACA AAATAGTGTT GAAAAACAAA AGAGGGGAGG TCCGCCTGAC CGCCAACGAC GTGTTCAAGA AAAACCTGGG TATCACGCAG AATGCAAACC AGAACTTCTA TTCCGAACGC CGTGTGGCCA CATTGTCGCG GTACTTCATG CTGAGCTTTA CCTACAACAT GCGCGGTATG ACGGCATCGG TGAAACGCGG TCCGGGATTC TTTTAA
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Protein sequence | MAVAHAQTGG RFTLKGTVTD TSGTALPEAT IMLLLPKDSS LVNFGRTAKD GTFEMKNLRR TTYIFKVSYV GYVPYQEIVD PKNQEVVDLG KAKMKVLQKE LYEVVIKTAR APLSIRGDTV EFDAKAFKVP PGSSVEDLLR KLPGVQVDGD GNIRAQGEEI KRVTVDGKRF FGDDPKMATK NLPAEAINKV QVFNGKTEQA KATGVDDGKR EKTLNLELKD SHKKGGFGKA VAGVGTDSRM EGKVSYNRFD EKQQFALLGF GNNTNQSGIA RNDYQDFKGS QSFNWGDDGD FGFSSGRYYG GDDITIQPNW GGQGSEGFTK NWAGGANYNF DTKKTKLSTS YFYNSTRAIT DVQTSSENFL TNDSYLTDGK NKTIAFTGNH RPAFRFEHNI DSLNTIILIS NSRINGGDNE YTAEQRSYRN ESMLTNQSTV NNLSDYNSFA MANLLLYRHK FKKKGRNFAA SVGYNINNSD EDRHQNSVNL FLQDSTKNSV INQLQQTEST RGNFKGSLSF VEPFAKKFFW ETFYNYSTRK DKVDRDVFDV EGNVDKVNPF LTRYYTNDFS YNRLGTSVRY SHKGLNLAMG LAGVQFDLRG KFALDESQQD MTRVDRTFKK LVPNVSLNYS LKNNKYVYAE YGLNVREPSI TDLQPIVDNS NPLYIVEGNP DLIPQTTHNA YAGFNMFNPA SFTNLYVNAY YNYNEDQIVY NRTISEDLVT TTKPMNISGG NNYGSYIGFG FPLKKTKATF GVNTGINFSN NLTYINNVKN ETKTDGYNFG ARLDLTPSDV FTLYTNANWN ISDTKYSINT SQNQKIVNAT YNAEMNIKMP KEIYFSGRLN YRSYKNDQFG FNQQVPILNL SVYKIVLKNK RGEVRLTAND VFKKNLGITQ NANQNFYSER RVATLSRYFM LSFTYNMRGM TASVKRGPGF F
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