| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2370 |
|---|
| Symbol | |
|---|
| ID | 8225942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2925411 |
|---|
| End bp | 2926511 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644930202 |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_003086753 |
|---|
| Protein GI | 255036132 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | [TIGR01927] o-succinylbenzoic acid (OSB) synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTAA AAATTGTGTA TAAGCCACAT ACGCTTCATT TTCGCAAGGA AGCGGGCACC
TCACGCGGGG TACTTACACA AAAGACATCC TGGATTGTGA TCGTGACCGA TTCCGAGAAG
CCGGGTGTCG CAGGGTATGG TGAATGCGGA CCATTGCCCG GCCTGAGCGT CGACGATATC
CCTGATTTCG AAGCGCAGCT GGCGGATGTC TGCACCATTT TCAACGAGCT CGATCTGGAA
GTTTTTCCAT TCAACCTCGG CATTATACTC GAACAGCTCA TTCCCGAAAA CCTGCCGTCT
ATCGGCGCCG GAGTAGAAAT GGCGCTGCTC GATATCATGA ACGGCGGGCA GCGAATGCTT
TTCAAAAATG GCTTTTCCGA CCGCGGCGAA GGCATTCTGA TGAACGGGCT GATCTGGATG
GGATCTTTTG AAAACATGCT CGCGCAGGTG GAAGAGAAGC TTTCGCAGGG TTTTACGACC
CTCAAAATGA AAGTAGGGGC GATTGATTTT GAGCAGGAAT GCCGGATACT GGAAGCGGTG
CGGAGCAGGT TTGATCCCAA TGCGATCACG CTGCGCGTAG ATGCGAACGG CGCATTCACG
GCTGAAAACG CCCATGAAAG ATTGGAGCGG CTCGGCGCAT TCGGCCTGCA TTCGATCGAA
CAGCCGGTGA AAGCCGGCCA GCACGAACTG ATGGCCGGAC TTTGTAAAAC CTCGCCCGTG
CCGGTGGCGC TGGACGAGGA ACTGATCGGC GTTACCAGCT ACCGTGAGAA ATTTGCATTG
CTGAAAAAGC TCGCGCCGCC GTTTATCATT CTTAAGCCGA CATTGCTCGG AGGGTTCACC
GCCACAAGCG AATGGATCGA GATCGCCAAC CGTCTGCAAA TCGGCTGGTG GATCACCTCC
GCATTGGAAT CGAACATCGG CCTCAATGCG ATTGCACAGT ACACTGCCTC ATTCCATAAT
CCCCTTCCGC AGGGATTGGG CACCGGGCAG CTCTACACCA ACAACTTCGA ATCGCCGCTC
ACGGTCGAAG ACGGACATTT GTACTACCGG AAAGAAATAG CCTGGACATT ACCAGGCCAC
GCCCTTGCGG AGCCAGCCTA A
|
|---|
| Protein sequence | MPLKIVYKPH TLHFRKEAGT SRGVLTQKTS WIVIVTDSEK PGVAGYGECG PLPGLSVDDI
PDFEAQLADV CTIFNELDLE VFPFNLGIIL EQLIPENLPS IGAGVEMALL DIMNGGQRML
FKNGFSDRGE GILMNGLIWM GSFENMLAQV EEKLSQGFTT LKMKVGAIDF EQECRILEAV
RSRFDPNAIT LRVDANGAFT AENAHERLER LGAFGLHSIE QPVKAGQHEL MAGLCKTSPV
PVALDEELIG VTSYREKFAL LKKLAPPFII LKPTLLGGFT ATSEWIEIAN RLQIGWWITS
ALESNIGLNA IAQYTASFHN PLPQGLGTGQ LYTNNFESPL TVEDGHLYYR KEIAWTLPGH
ALAEPA
|
|---|
| |