Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2337 |
Symbol | |
ID | 8225909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2888129 |
End bp | 2891572 |
Gene Length | 3444 bp |
Protein Length | 1147 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644930170 |
Product | hypothetical protein |
Protein accession | YP_003086721 |
Protein GI | 255036100 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00625396 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCATG CACATTTTGG CTGGGCGCAG GAAGGCAGCC AGGGCAATAC CACGATCTTC GGCGGCGCCC AGATGAGCTT TTTTTCCAAT CATGATTTCG TAGCAGGCGG TGCGGGCGTG CAGCCGGGTG TGATCCTGAC CGAGCGCGCG GCCGGCAACT TCGGCGTTCT TAATTTTGTC GGTGACAATC TGACATCTAA TGGCGCATCC GACGCCGGGT ATGTGGACGG ATATGTACGT AAATACGGCT CAGGACAGTT CATTTTTCCG GTGGGCGATA ACGGCTCGCT AGGCCCGTTT GCTGCTTCGG GCGATGGAAC GATGGGCGCC TACTTCCGCG CCGATCCCAA TGCAGCCGCG ACCAGCAACC TGTTTTCAGG CACAGATTAC CCGGCACTTC CAACCGGCGG TCCGTTTGGT ACCAGCAGCA GGGGTGCAGG CGTGACAGCC GTCAGCACGG TAGAATACTG GGACATCGAC GGCGCGAGCG AAACACCGCT CACCCTTACC TGGGACGCGT CCAGCGGCAT AGCCGGCCTG ACAGCCAGCC AGCTTGCCAA TTTGACAATC GCCGGTTGGG ACGGGACTAA ATGGGTAGCC ATCCCTTCAT CTATTGACCC TACGTCGGTG CTCGGGGGGG GCAGTGATCT GAATGCAGGC TCGATTACCA CGACAGGAAC CCTTTCACCG GACTCCTATA TTGCCTACAC CTTTGCGTCG CGCGAGCTGG CGCCACTTTC CACGATTGTG ATTGCAAAGA AAGCGCAATC GGAAGTGAGC CCAGGTGTTG ATTTTGGTTT CACAACCAAC CTGCCTTCCG GCAGCTCATT TACGCTGAAT GACGATCCGG CATTCGTCTC TTTGCAGGAC GTGGGGATGG GAACTAACAA TACGATTTGG GCCATTGGCG CTCCGGCGTC AGGAACGGGC AATGGTGGGG TGTACTACCG TGCCGCCGGC TCATCCAGCT GGACGACTGC TCCGGGCTTG GGTACACGCG TTGATGTAGA TCAAAATGGT ACGCCCATAC TGGTCAACGC CGAGGGTTTT ATGTACACAT GGGATGGAAG CGCTTTTATT CCCACAACGC CGACAACGAT CAACGCTTTT GATATTGGAA TGTCGGCCGG TGCTACGCAA GCGGCTTATT TGCTTGCTTT CAACACAGCC GGTTGCTACA ATTTGTTCAG GTGGAATGGC GGCAACAGCT ATACCGGTTT TCCCAACGTT TGCGGTTCCC GGGTGGACGT AGCGCCGGAT GGGTCGGTAT ATGTACTTAG TGAAACGGCT GGACAGGTTT ACCGTATCAC AGTCTCCGGT GATGTTGCAA CGATTGCTGA AACATATCCG TCCCAGGGGT TCTCAGATAT CACGGTTGCT GCTGATGGCA GCGTTTGGGC CGTCAACAGT GCGCAAGCGT ACCGTCTTTC CGGAAACAAT TGGGTGGTAG ACCCCAATAG TGGAGGGGCG CTTTCCGGAA GCAACAATGG CGGTATCTCC GCCGGCGCCG ATGGGGACAC ACCAGTGCTG ACCTACAATG CCAAGGCGGA TGCTCCAACG ACGATGCGCG GAAGACTTAT ACAGCGTAGG GAAGATGGGG GATGGCTCAA TGACCATACT GTCAGGACTG CGGGTGCCGG CAATAGCATC ATTTATAACG TTGCGCCAGG TACATACACG ATTTCCGAAA ACGCAGCGCC TGGATCATGG GAGCTGATCA AAATCAACAC TGCCGGCGGA TCAGTAAGCA CCGACATTGC TAACCGGACA GCGACTGTAA CAGTAACCGC CGGTCAGACG GCACATTTGG AATTCGTCAA TTACAATATC CAGACTTCAC CGATTTCAAA TTCGTGTGGT ACCCCTTTTG TTGAGACATT CGGCGCGTCT GGTTCTGAAA CAGTTTCGTC AATTCCTTCG ATATACTCGC CGTACCACTT CAATGAATAC GGCGCTGAAA CCCACACGGT AGTAAATAAC TTTCAGGCGC TATATTACGG GACAGTTGCC CCTGACCACA CGGCCGGCGA TGTAGGAGGT TACTTTTTAA ATGTGAACGG AGGTTTCGGC CAGGACGAGG TTTTCCGTCG CAGGTTTAGC GGACTGCTCC CTGGTGCATC GTATTCACTT TCACTTTGGG CCACTAACTT AACAACCGCG CCGGGCTATG TGCTTCCAAA CCTGGTACTG GAAGCAAGAA ACTTGCAAGG TGGTCTGATT TCCTCGCAAT CGACGGGTGA TATACCGTTT ACGTCCGAAA CCGACTGGCG CCAGTATTCG ATGACATTTG TCGCTGACGC CTCTGGGACC GTTGATTTCA TTATCCGCAA CAATCAGCAG GTCCCAGGGA TCAACGGCAA CGATTTCGCC ATTGACGACA TAACCATCGG AATTGGCTGC GACTATGGCG ACGCACCGGA TTCGTACAGT ACGCTCACGA CCGGAAACGG CCCCTCGCAC CGCGTGACAA GCTTCCTGAC CATGGGCAGC ACAATAGACG CGGAAACGGA TGGAGCCCCG GGCCAACAGG CTAATGGTGA TAACAACACC GGCTTGAATG ATGAAGACGG TGTGACGGCG TTCCCTGCGA TTGCCGGAGG ATCTACCACC TCGATCGTCA ACTACACAGT CAATGTTGCC ACTGTTAACC TGACCACATC GACGGCGAAT CTTTGCGGCT GGATCGACTG GAATAACAAC GGAACATTTG AAGCCAGCGA AGGCGTTTGC ACAACAGTCG CCCCCGGCGC GTCGAGCGCA ACGCTTATTT GGCCCAGCTC GACCTTGGGC GGGACAACAG GTTCTACCGG TGTGTTCGCA CGTTTTAGGC TCACCACCGA TCCGCTCACG GCTGCCAGCG TCAACGGCGC AGCAGCGGAC GGTGAAGTGG AAGATTATTT CATCGCATTT GAAAATCCGC TTCCAGTTAC TTTGGCCCGT TTTACGGCAA CGGCCGAAAC TGGCAACGTA CTGCTGGCAT GGTCTACAAC CGAAGAGAAA GGCAGCGACC GCTTTGAGAT CGAGCGCAGT GTAGATGGGA AATCGTGGGC AATGATCGGT AGCATAGCTT CGCGCGGCGA GAGCAATGCA CTGCTCGATT ATTCATATAA CGATTTAAGA CCGGCCATGG GCACCAATCT GTACCGCCTG AAAATGGTGG ATACAGACGG CACTTATGCA TTCAGCAGCA TTCGTGAGGT GAAGCTGAAA GGTGTGATGG CGATTGCTTA TCCAAACCCG GTTTCAGATA AGCTTCTGAT CGCCGACCAC GGCCAGGTTA AACAGATAAC ACTGACCAGC GTCGCAGGTG TACAGGTGTT CAGTAGCCGC AGCATTCCTG CTGGTGGTGT AGATGTAAGC AGTCTGGCAC CTGGTGTATA TACGCTTACT ATGACCCTGT TTGACGGCAC TATTAGCACA CAAAAGATCG CCGTATCAAG GTAA
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Protein sequence | MGHAHFGWAQ EGSQGNTTIF GGAQMSFFSN HDFVAGGAGV QPGVILTERA AGNFGVLNFV GDNLTSNGAS DAGYVDGYVR KYGSGQFIFP VGDNGSLGPF AASGDGTMGA YFRADPNAAA TSNLFSGTDY PALPTGGPFG TSSRGAGVTA VSTVEYWDID GASETPLTLT WDASSGIAGL TASQLANLTI AGWDGTKWVA IPSSIDPTSV LGGGSDLNAG SITTTGTLSP DSYIAYTFAS RELAPLSTIV IAKKAQSEVS PGVDFGFTTN LPSGSSFTLN DDPAFVSLQD VGMGTNNTIW AIGAPASGTG NGGVYYRAAG SSSWTTAPGL GTRVDVDQNG TPILVNAEGF MYTWDGSAFI PTTPTTINAF DIGMSAGATQ AAYLLAFNTA GCYNLFRWNG GNSYTGFPNV CGSRVDVAPD GSVYVLSETA GQVYRITVSG DVATIAETYP SQGFSDITVA ADGSVWAVNS AQAYRLSGNN WVVDPNSGGA LSGSNNGGIS AGADGDTPVL TYNAKADAPT TMRGRLIQRR EDGGWLNDHT VRTAGAGNSI IYNVAPGTYT ISENAAPGSW ELIKINTAGG SVSTDIANRT ATVTVTAGQT AHLEFVNYNI QTSPISNSCG TPFVETFGAS GSETVSSIPS IYSPYHFNEY GAETHTVVNN FQALYYGTVA PDHTAGDVGG YFLNVNGGFG QDEVFRRRFS GLLPGASYSL SLWATNLTTA PGYVLPNLVL EARNLQGGLI SSQSTGDIPF TSETDWRQYS MTFVADASGT VDFIIRNNQQ VPGINGNDFA IDDITIGIGC DYGDAPDSYS TLTTGNGPSH RVTSFLTMGS TIDAETDGAP GQQANGDNNT GLNDEDGVTA FPAIAGGSTT SIVNYTVNVA TVNLTTSTAN LCGWIDWNNN GTFEASEGVC TTVAPGASSA TLIWPSSTLG GTTGSTGVFA RFRLTTDPLT AASVNGAAAD GEVEDYFIAF ENPLPVTLAR FTATAETGNV LLAWSTTEEK GSDRFEIERS VDGKSWAMIG SIASRGESNA LLDYSYNDLR PAMGTNLYRL KMVDTDGTYA FSSIREVKLK GVMAIAYPNP VSDKLLIADH GQVKQITLTS VAGVQVFSSR SIPAGGVDVS SLAPGVYTLT MTLFDGTIST QKIAVSR
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