Gene Dfer_2337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2337 
Symbol 
ID8225909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2888129 
End bp2891572 
Gene Length3444 bp 
Protein Length1147 aa 
Translation table11 
GC content54% 
IMG OID644930170 
Producthypothetical protein 
Protein accessionYP_003086721 
Protein GI255036100 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00625396 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCATG CACATTTTGG CTGGGCGCAG GAAGGCAGCC AGGGCAATAC CACGATCTTC 
GGCGGCGCCC AGATGAGCTT TTTTTCCAAT CATGATTTCG TAGCAGGCGG TGCGGGCGTG
CAGCCGGGTG TGATCCTGAC CGAGCGCGCG GCCGGCAACT TCGGCGTTCT TAATTTTGTC
GGTGACAATC TGACATCTAA TGGCGCATCC GACGCCGGGT ATGTGGACGG ATATGTACGT
AAATACGGCT CAGGACAGTT CATTTTTCCG GTGGGCGATA ACGGCTCGCT AGGCCCGTTT
GCTGCTTCGG GCGATGGAAC GATGGGCGCC TACTTCCGCG CCGATCCCAA TGCAGCCGCG
ACCAGCAACC TGTTTTCAGG CACAGATTAC CCGGCACTTC CAACCGGCGG TCCGTTTGGT
ACCAGCAGCA GGGGTGCAGG CGTGACAGCC GTCAGCACGG TAGAATACTG GGACATCGAC
GGCGCGAGCG AAACACCGCT CACCCTTACC TGGGACGCGT CCAGCGGCAT AGCCGGCCTG
ACAGCCAGCC AGCTTGCCAA TTTGACAATC GCCGGTTGGG ACGGGACTAA ATGGGTAGCC
ATCCCTTCAT CTATTGACCC TACGTCGGTG CTCGGGGGGG GCAGTGATCT GAATGCAGGC
TCGATTACCA CGACAGGAAC CCTTTCACCG GACTCCTATA TTGCCTACAC CTTTGCGTCG
CGCGAGCTGG CGCCACTTTC CACGATTGTG ATTGCAAAGA AAGCGCAATC GGAAGTGAGC
CCAGGTGTTG ATTTTGGTTT CACAACCAAC CTGCCTTCCG GCAGCTCATT TACGCTGAAT
GACGATCCGG CATTCGTCTC TTTGCAGGAC GTGGGGATGG GAACTAACAA TACGATTTGG
GCCATTGGCG CTCCGGCGTC AGGAACGGGC AATGGTGGGG TGTACTACCG TGCCGCCGGC
TCATCCAGCT GGACGACTGC TCCGGGCTTG GGTACACGCG TTGATGTAGA TCAAAATGGT
ACGCCCATAC TGGTCAACGC CGAGGGTTTT ATGTACACAT GGGATGGAAG CGCTTTTATT
CCCACAACGC CGACAACGAT CAACGCTTTT GATATTGGAA TGTCGGCCGG TGCTACGCAA
GCGGCTTATT TGCTTGCTTT CAACACAGCC GGTTGCTACA ATTTGTTCAG GTGGAATGGC
GGCAACAGCT ATACCGGTTT TCCCAACGTT TGCGGTTCCC GGGTGGACGT AGCGCCGGAT
GGGTCGGTAT ATGTACTTAG TGAAACGGCT GGACAGGTTT ACCGTATCAC AGTCTCCGGT
GATGTTGCAA CGATTGCTGA AACATATCCG TCCCAGGGGT TCTCAGATAT CACGGTTGCT
GCTGATGGCA GCGTTTGGGC CGTCAACAGT GCGCAAGCGT ACCGTCTTTC CGGAAACAAT
TGGGTGGTAG ACCCCAATAG TGGAGGGGCG CTTTCCGGAA GCAACAATGG CGGTATCTCC
GCCGGCGCCG ATGGGGACAC ACCAGTGCTG ACCTACAATG CCAAGGCGGA TGCTCCAACG
ACGATGCGCG GAAGACTTAT ACAGCGTAGG GAAGATGGGG GATGGCTCAA TGACCATACT
GTCAGGACTG CGGGTGCCGG CAATAGCATC ATTTATAACG TTGCGCCAGG TACATACACG
ATTTCCGAAA ACGCAGCGCC TGGATCATGG GAGCTGATCA AAATCAACAC TGCCGGCGGA
TCAGTAAGCA CCGACATTGC TAACCGGACA GCGACTGTAA CAGTAACCGC CGGTCAGACG
GCACATTTGG AATTCGTCAA TTACAATATC CAGACTTCAC CGATTTCAAA TTCGTGTGGT
ACCCCTTTTG TTGAGACATT CGGCGCGTCT GGTTCTGAAA CAGTTTCGTC AATTCCTTCG
ATATACTCGC CGTACCACTT CAATGAATAC GGCGCTGAAA CCCACACGGT AGTAAATAAC
TTTCAGGCGC TATATTACGG GACAGTTGCC CCTGACCACA CGGCCGGCGA TGTAGGAGGT
TACTTTTTAA ATGTGAACGG AGGTTTCGGC CAGGACGAGG TTTTCCGTCG CAGGTTTAGC
GGACTGCTCC CTGGTGCATC GTATTCACTT TCACTTTGGG CCACTAACTT AACAACCGCG
CCGGGCTATG TGCTTCCAAA CCTGGTACTG GAAGCAAGAA ACTTGCAAGG TGGTCTGATT
TCCTCGCAAT CGACGGGTGA TATACCGTTT ACGTCCGAAA CCGACTGGCG CCAGTATTCG
ATGACATTTG TCGCTGACGC CTCTGGGACC GTTGATTTCA TTATCCGCAA CAATCAGCAG
GTCCCAGGGA TCAACGGCAA CGATTTCGCC ATTGACGACA TAACCATCGG AATTGGCTGC
GACTATGGCG ACGCACCGGA TTCGTACAGT ACGCTCACGA CCGGAAACGG CCCCTCGCAC
CGCGTGACAA GCTTCCTGAC CATGGGCAGC ACAATAGACG CGGAAACGGA TGGAGCCCCG
GGCCAACAGG CTAATGGTGA TAACAACACC GGCTTGAATG ATGAAGACGG TGTGACGGCG
TTCCCTGCGA TTGCCGGAGG ATCTACCACC TCGATCGTCA ACTACACAGT CAATGTTGCC
ACTGTTAACC TGACCACATC GACGGCGAAT CTTTGCGGCT GGATCGACTG GAATAACAAC
GGAACATTTG AAGCCAGCGA AGGCGTTTGC ACAACAGTCG CCCCCGGCGC GTCGAGCGCA
ACGCTTATTT GGCCCAGCTC GACCTTGGGC GGGACAACAG GTTCTACCGG TGTGTTCGCA
CGTTTTAGGC TCACCACCGA TCCGCTCACG GCTGCCAGCG TCAACGGCGC AGCAGCGGAC
GGTGAAGTGG AAGATTATTT CATCGCATTT GAAAATCCGC TTCCAGTTAC TTTGGCCCGT
TTTACGGCAA CGGCCGAAAC TGGCAACGTA CTGCTGGCAT GGTCTACAAC CGAAGAGAAA
GGCAGCGACC GCTTTGAGAT CGAGCGCAGT GTAGATGGGA AATCGTGGGC AATGATCGGT
AGCATAGCTT CGCGCGGCGA GAGCAATGCA CTGCTCGATT ATTCATATAA CGATTTAAGA
CCGGCCATGG GCACCAATCT GTACCGCCTG AAAATGGTGG ATACAGACGG CACTTATGCA
TTCAGCAGCA TTCGTGAGGT GAAGCTGAAA GGTGTGATGG CGATTGCTTA TCCAAACCCG
GTTTCAGATA AGCTTCTGAT CGCCGACCAC GGCCAGGTTA AACAGATAAC ACTGACCAGC
GTCGCAGGTG TACAGGTGTT CAGTAGCCGC AGCATTCCTG CTGGTGGTGT AGATGTAAGC
AGTCTGGCAC CTGGTGTATA TACGCTTACT ATGACCCTGT TTGACGGCAC TATTAGCACA
CAAAAGATCG CCGTATCAAG GTAA
 
Protein sequence
MGHAHFGWAQ EGSQGNTTIF GGAQMSFFSN HDFVAGGAGV QPGVILTERA AGNFGVLNFV 
GDNLTSNGAS DAGYVDGYVR KYGSGQFIFP VGDNGSLGPF AASGDGTMGA YFRADPNAAA
TSNLFSGTDY PALPTGGPFG TSSRGAGVTA VSTVEYWDID GASETPLTLT WDASSGIAGL
TASQLANLTI AGWDGTKWVA IPSSIDPTSV LGGGSDLNAG SITTTGTLSP DSYIAYTFAS
RELAPLSTIV IAKKAQSEVS PGVDFGFTTN LPSGSSFTLN DDPAFVSLQD VGMGTNNTIW
AIGAPASGTG NGGVYYRAAG SSSWTTAPGL GTRVDVDQNG TPILVNAEGF MYTWDGSAFI
PTTPTTINAF DIGMSAGATQ AAYLLAFNTA GCYNLFRWNG GNSYTGFPNV CGSRVDVAPD
GSVYVLSETA GQVYRITVSG DVATIAETYP SQGFSDITVA ADGSVWAVNS AQAYRLSGNN
WVVDPNSGGA LSGSNNGGIS AGADGDTPVL TYNAKADAPT TMRGRLIQRR EDGGWLNDHT
VRTAGAGNSI IYNVAPGTYT ISENAAPGSW ELIKINTAGG SVSTDIANRT ATVTVTAGQT
AHLEFVNYNI QTSPISNSCG TPFVETFGAS GSETVSSIPS IYSPYHFNEY GAETHTVVNN
FQALYYGTVA PDHTAGDVGG YFLNVNGGFG QDEVFRRRFS GLLPGASYSL SLWATNLTTA
PGYVLPNLVL EARNLQGGLI SSQSTGDIPF TSETDWRQYS MTFVADASGT VDFIIRNNQQ
VPGINGNDFA IDDITIGIGC DYGDAPDSYS TLTTGNGPSH RVTSFLTMGS TIDAETDGAP
GQQANGDNNT GLNDEDGVTA FPAIAGGSTT SIVNYTVNVA TVNLTTSTAN LCGWIDWNNN
GTFEASEGVC TTVAPGASSA TLIWPSSTLG GTTGSTGVFA RFRLTTDPLT AASVNGAAAD
GEVEDYFIAF ENPLPVTLAR FTATAETGNV LLAWSTTEEK GSDRFEIERS VDGKSWAMIG
SIASRGESNA LLDYSYNDLR PAMGTNLYRL KMVDTDGTYA FSSIREVKLK GVMAIAYPNP
VSDKLLIADH GQVKQITLTS VAGVQVFSSR SIPAGGVDVS SLAPGVYTLT MTLFDGTIST
QKIAVSR