Gene Dfer_2314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2314 
Symbol 
ID8225886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2860880 
End bp2861701 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content46% 
IMG OID644930147 
ProductIntegrase catalytic region 
Protein accessionYP_003086698 
Protein GI255036077 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACAGAGG AGATTGTTCG CGAGCACGAT ATCGCTGTGA GCAGAGCCTG TAAAATCGTT 
AGCCTTGTTC GCTCTCAATA TTATTACAGC AGTAAGAAGG ATGATTCTGA GGTAATTGAG
TCGTTGCAGG ACTTGGCATT CAAACACCCT TCATACGGGT TTAGAAAGCT GTTTGCCTAC
CTGCGAAGAT CAGGTAAGCC ATGGAATCAT AAGCGAGTTC ACCGCATTTA TCAAGTTTTG
AAGCTGAATA AGAGGCGAAA GGGGAAGCGG CGATTACCCG ATCGGGTTAG GCAACCTTTA
GCTCAGCCAG CGCAGGTGAA TGAAGTTTGG AGTGTCGATT TTATGAGCGA CAGTATGGTC
GGCAACCGCA AATTCCGAAC GTTCAACGTC ATTGACGACT GCTCACGTGA GGCATTGGCC
ATAGAAATCG ATACTTCACT TTCCGCGAAG CGGATCATTA GGACTTTGAA CCGTATTGGA
GAAAGCAGAG GATTCCCAAT GGCGATCAGA TCGGACAACG GACCGGAATT CACTTCCGGA
AATTTCACGA TCTGGTGTGA GGAAAAAGGC ATTGAAGCCA AATTTATACA GCCAGGCAAG
CCAACGCAAA ATGGCTATAT CGAACGATTT AATCGACTGT ACAGAGAAGC TGTATTAGAC
GCTTATTTGT TCTTCGACCT GGATCAGGTC AGGCAATTAA CCGCGGAATG GATTGAAGAA
TATAACCAGC GACGACCACA TGAAGGACTG GGCAATTTGA CACCATTTGA ATGGAAGGAA
TCGCTGGTGA AAAAGAAAAT TCACCACCAA ATGACTGTCT GA
 
Protein sequence
MTEEIVREHD IAVSRACKIV SLVRSQYYYS SKKDDSEVIE SLQDLAFKHP SYGFRKLFAY 
LRRSGKPWNH KRVHRIYQVL KLNKRRKGKR RLPDRVRQPL AQPAQVNEVW SVDFMSDSMV
GNRKFRTFNV IDDCSREALA IEIDTSLSAK RIIRTLNRIG ESRGFPMAIR SDNGPEFTSG
NFTIWCEEKG IEAKFIQPGK PTQNGYIERF NRLYREAVLD AYLFFDLDQV RQLTAEWIEE
YNQRRPHEGL GNLTPFEWKE SLVKKKIHHQ MTV