| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2304 |
|---|
| Symbol | |
|---|
| ID | 8225876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2851940 |
|---|
| End bp | 2852518 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644930139 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003086690 |
|---|
| Protein GI | 255036069 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.31442 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAACGGG ATATCGACAT ATGGAATGCG TTTCGGTCGG GGGACAAAGA CGCTTTTGCG
ACGATTTATG CGTTGTATTT CGATGCATTG TATTCCTACG GCAAGCGTTT TATCGCCGAT
GAAACCCGCG TGGAGGACGC TATTCAGGAC CTTTTCATCA ACCTCTGGCG CAGTCACGCC
AATGTGTCCC CGGTAGATAA TATCAAGTTC TACCTCTTCC GCAGCCTTCG CCGCGACATC
TACCGCATCA CCGAAAAGGA GAAAAATTTC CCGAAAGTGG AGCTGGACGC TTTCCTGCAC
GAGTACGACC TTCCCGGCGA GGAGCACAGC ATTCACGACG AGGAAAAAGA GCTCACCCAA
AAGCTCGCAG CGGTGCTTCA AAACCTCCCC AAACGCCAGC TGGAAGCGAT TACGCTGCGC
TATTACGAAA ATTTTAGCAT CAGCGAAATC GCCGAAATCA TGGACGTTTC CGACAAAACC
GTCCGCAACA CGCTCCACAA TTCCCTGACC TTGCTCCGCA AAAATTCCCG CCTTTTCTAC
ACGGTTTTCG AGCTGGCGCT GGCTTTTATC TGGCATTGA
|
|---|
| Protein sequence | MQRDIDIWNA FRSGDKDAFA TIYALYFDAL YSYGKRFIAD ETRVEDAIQD LFINLWRSHA
NVSPVDNIKF YLFRSLRRDI YRITEKEKNF PKVELDAFLH EYDLPGEEHS IHDEEKELTQ
KLAAVLQNLP KRQLEAITLR YYENFSISEI AEIMDVSDKT VRNTLHNSLT LLRKNSRLFY
TVFELALAFI WH
|
|---|
| |