Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2295 |
Symbol | |
ID | 8225867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 2835871 |
End bp | 2836683 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644930130 |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_003086681 |
Protein GI | 255036060 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.858979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAG AGATCACACC GCAGGATATA TCCAGTTACC AACAAAATGG CTTTATTGTC ATTGAAGATT TTTTATCCGA GCAGGAACTA GCAGAGTGGC GAAATGCGCT GGACGAAGCA TTGGCCAACC GCAAAGGAAA CAAACTCCCC GACCGAAAAG AGGTTTACGG AAAAGGCGAT GATGCCGACA AATCGTACTA CGATAATGTA TTTGACCAGC TGCTGAACCT CTGGCAGGAT AATGCCGGAA TCAGGAAACT GATGCTCGAC GAGCGCATTG GGAAAATGGC CGCCCAACTC GCCGAGGTAG ACGGAATACG AATCTGGCAC GATCAGGCGC TGATCAAAAA ACCCTGGGCC AACCCAACCT CCTGGCATTT GGACACCCCT TACTGGTCGT TTACCGACCG CCGGGCATTG TCGATTTGGG TTGCCCTGGA CGATGCAACA TTGGAAAATG GCTGCCTGTT TTTCATTCCC GGATCGCACC ACACGACGAC ATTTGAAAAC CCGGGTATCG GCAAAAACAT GGGTGCTATT TTTACAACTT ACCCACAATT TTACAAAACC AAATCGGTGG CAGTTCCGAT GAAAGCGGGC AGCTGTTCAT TTCATAATGG CCTCACCATT CACGGCGCAC ATGCCAACAT GACCCCGGGA TACCGGCGCG CCATGACCTG CGCGTATATG CCGGATGGAA ATACATTTAA TGGTATCCAG AATATATTAA GTGACGAGGA AGTTGCTGGC TTATCGATTG GAAGTTTATT AAATAAAGAC GCAATAAACC CATTAATTTA TTCGCGTTCC TAA
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Protein sequence | MKTEITPQDI SSYQQNGFIV IEDFLSEQEL AEWRNALDEA LANRKGNKLP DRKEVYGKGD DADKSYYDNV FDQLLNLWQD NAGIRKLMLD ERIGKMAAQL AEVDGIRIWH DQALIKKPWA NPTSWHLDTP YWSFTDRRAL SIWVALDDAT LENGCLFFIP GSHHTTTFEN PGIGKNMGAI FTTYPQFYKT KSVAVPMKAG SCSFHNGLTI HGAHANMTPG YRRAMTCAYM PDGNTFNGIQ NILSDEEVAG LSIGSLLNKD AINPLIYSRS
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