| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2293 |
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| Symbol | |
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| ID | 8225865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2831530 |
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| End bp | 2833074 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644930128 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003086679 |
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| Protein GI | 255036058 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CACTTATAAT CGGGATCGTG GCCGTGATGC TATCCGGCTG CAAGGAAGAC
TTCCTAAACC TCACACCGCC CACCAGCCTG AGTTCCGCAA CCTATTTTCA AAACGAAGAA
CAATTCAGGC AGGCAATCAA CGGCGCGTAT ACACCCATGC GTGAATTGAC GGACGTAGGC
GTATATGACG ACGAAATGCG GTCGGATAAC ACTTTCTTCA CCATTTATCA GGCAAACAGA
GGTCTGGATA AAGCGCGCGA AGCTTATCCC CAGTTCCTGA TCGATGCAAC CGCTTCCGCC
ATTCCCAACA CGCCCGGCAG CCGGTGGCGC GCCAGTTACC GGGGCATTGC GTATGTGAAC
ACGATCATTG ACCGGCTGGC AACCAATAAC GCGGTTTCCG CCGAAGCGAA GAATGCCATT
CTGGGCGAAG CACTTTTCTT ACGTGCCTAT TACTATTTCA GTCTGGTAAC CCATTTTGGC
GGCGTTCCTT TGTTGCTGAA AGAAGTTACC AATCCGGAGG AATCTTTCCA GCCACGAAAC
ACGGCTGCGG AAGTGTATGC CCAAATTAAA ACCGATGTAA AAAGCGCGAT TGACCTGCTT
CCTGTTGCCA GCACTTTTCC GCAAAGCGGA CGTGCTACCA AGGGAGCGGC CAAGATGTTG
CTCGCTTATG CATTGATGTC GGGTGACACC AGGGACTATG CCGCTGCCGA AAAAGAGCTG
CTCGATATCA CTAAAATGAA TTACGCGCTC TTGCCGGATT ACGCCAAAGT ATTTGACCCC
ACGAACAAAA ACCACCAGGA GTCGATTTTC GACGTGCAAT ACATGGCCGA CCGGGTGAGC
GGGCAGCAAA GTGCTTTTGC CTGGCAGTTT ATGCCCAAAG TCACCAATCC GCAGTTCCTG
ATGGGTTTTG ATGGTGGCCG TATGAACATT TTTAGCGGCT GGAACGTGCC TACCGATGAG
ATGGTGGCTT CTTATGAAAA AGGTGATTTA AGGTTGCCGG CGTCGATTGC TGTTGTCGAG
GGGACCATCA GCGGAGTCGA AGATTTCACG GCCGAGCTCC TTACTTCTCC TGTCAATTAC
ACGCCGAAGG CCGGGAAGGC ATTCCGCTAC ATGATCCGTA AATACTTCCA TCCCCCTTAC
GATATCGCCT TCAATACGCC GGACAATTTC CCCGTGTACC GCTATTCCGG GGCATTGCTG
TTGCTGGCTG AATGCCTGGT ACAGCAAAAC AAAGCCGCGG CTGCCCTGCC CTATCTGAAC
CAGGTGCGTC GCCGGGCTGG ATTGCCCGAC CTGGGAGCTG CTACGCTGGA TGCCGTTTCC
AAAGAAATGC GTCATGAGCT TGCCTTTGAA AACCGCCGCT GGCAGGACCT GATCCGGATT
GGCAAGGCCA TTGAAGTAGC CACAGCCAAA GGAAACCGGT TGAAAGCCCA GTACGGCTGG
ATTCTTCCTG CCGCCTTCAA TGTGACACCT CAGAAACTGC TCGACCCCAT TCCGTTCCGG
GAAACGCAGA TCAATACCCA GTTGGAGCAG AATCCGGGTT ATTGA
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| Protein sequence | MKKTLIIGIV AVMLSGCKED FLNLTPPTSL SSATYFQNEE QFRQAINGAY TPMRELTDVG
VYDDEMRSDN TFFTIYQANR GLDKAREAYP QFLIDATASA IPNTPGSRWR ASYRGIAYVN
TIIDRLATNN AVSAEAKNAI LGEALFLRAY YYFSLVTHFG GVPLLLKEVT NPEESFQPRN
TAAEVYAQIK TDVKSAIDLL PVASTFPQSG RATKGAAKML LAYALMSGDT RDYAAAEKEL
LDITKMNYAL LPDYAKVFDP TNKNHQESIF DVQYMADRVS GQQSAFAWQF MPKVTNPQFL
MGFDGGRMNI FSGWNVPTDE MVASYEKGDL RLPASIAVVE GTISGVEDFT AELLTSPVNY
TPKAGKAFRY MIRKYFHPPY DIAFNTPDNF PVYRYSGALL LLAECLVQQN KAAAALPYLN
QVRRRAGLPD LGAATLDAVS KEMRHELAFE NRRWQDLIRI GKAIEVATAK GNRLKAQYGW
ILPAAFNVTP QKLLDPIPFR ETQINTQLEQ NPGY
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