| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2276 |
|---|
| Symbol | |
|---|
| ID | 8225848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2807775 |
|---|
| End bp | 2808803 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644930112 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_003086663 |
|---|
| Protein GI | 255036042 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.54286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCCT TGCTTGCCAC CAGTTGGAGA GTAGCTGCCC AAAGCTGCAT TGTAACCGGC
CAGATCAACG GCGTTGGCGC TATACCCATT CAATTCAGAT ACATACAGAA TGGCGTGGAT
AAGATAGATA CGGTATTCGC CACGGGTGAT CGGTTCCGGT ACGTCGCCCA GAAGCCCGAC
AATGGTATGT TCGATATTTT CATCCAAAAC CCGGCGTGGA CAGCCGTGTG GTATGAGGCC
GGAAACCTTA CTGTTTCGGG CAACATCGAC AAAGCGGGCC AGCTGGAAGT GAAAGGCACT
AAGGAAAACG ACCTGCTCAC GGCCTTCAAC CAACTGAGGT GGGCCTACCG CGAAAAGGCT
CAGGGGCAGC CTGCCGAAGC GGTGGATAAA CTGATCGAAG AACACACGCG GAAGACCTGG
GCATTTATGA AGGTAAACAC GCCATCGTTA ACCGCCATGT ACCTTTTGAA CGGGCTGACC
AACGGCGCCG ATGTCAAAAT TGAAGACCTG GACGAAGCAT TCCACGAATT CCCGCCCCAA
ATCCGCGAAA GTTACTATGG AAAAAGGGCC AAAGAACGCA TTGAAATTGT AAAAAACCAG
CCTGTAAAAG GCAAGAAAGC GCCTGATTTC AAACTGGTTT CGTCGAAAGG CGACTCGGTG
CAATTGTCTC GGCATTCAGG TAAATATGTA CTGCTGGATT TCTGGGGACA TTGGTGCGGG
CCGTGCATCC GGTCCATGCC GGAACTGCGG GAATTTCATG AAAAGTATAA AAGCAAAATC
ACCCTTATCG GCATTGCCGC CGAATGGGGC GACGACAAGG AAACCTGGCT CAAAACGATC
GAAAAGCACC AGGCCAACTG GATTCAGCTC ACCGATTTCC GGTTTGACCA GGGCGACATC
ATGAAAACCT ACAATATATC CGGGTTCCCC ACTTATCTTC TCATCGACCC GAAAGGAATG
GTGGTAGCGA GGGAAAACAA TTTCCAGGCG ATAGCAAAAA TCGTCGCCGA AACGAAAGCG
CTCCGATAG
|
|---|
| Protein sequence | MLALLATSWR VAAQSCIVTG QINGVGAIPI QFRYIQNGVD KIDTVFATGD RFRYVAQKPD
NGMFDIFIQN PAWTAVWYEA GNLTVSGNID KAGQLEVKGT KENDLLTAFN QLRWAYREKA
QGQPAEAVDK LIEEHTRKTW AFMKVNTPSL TAMYLLNGLT NGADVKIEDL DEAFHEFPPQ
IRESYYGKRA KERIEIVKNQ PVKGKKAPDF KLVSSKGDSV QLSRHSGKYV LLDFWGHWCG
PCIRSMPELR EFHEKYKSKI TLIGIAAEWG DDKETWLKTI EKHQANWIQL TDFRFDQGDI
MKTYNISGFP TYLLIDPKGM VVARENNFQA IAKIVAETKA LR
|
|---|
| |