| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2273 |
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| Symbol | |
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| ID | 8225845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2801779 |
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| End bp | 2804763 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644930109 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086660 |
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| Protein GI | 255036039 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGGC TGTCCCTCGC AAGCGCTTCC CCCGGCATCG CGCTTCCGCT CGCCGGCAGA
GCCCCGTCGG GGATTTTTCA GGCCGACCGC ACGGTAACCG GCAGCGTGAA AGACGAGAAG
GGCGAACCGC TCGTCGGCGT GACGGTCACC GTCAAGAACA ACAATGCCAT CGGCGCCACC
ACCGACCTCA ATGGCGAGTT TTCGCTCACG ATTCCGCAGA ATCTTCTGGA TAATGCCACG
CTGGTGTTCA GTTTCGTGGG CTATGCGCCG ATGGAAACGG AGCTGGGCAG CCAAACCAGG
CTGGACATCG CCATGAACTC GTCGATCAGC CAGCTCGATC AGGTCGTGAT CGTGGGGTAC
TCGGCCAAGA AGGTGAAATT CCTGTCCAGC TCCGTGTCTA CGATCAACAA CGAGAAGCTG
CGGGATGTGA CGTCCAACGA ACTGCCGAAT CTGTTGCAGG GCAAAGCGCC GGGCGTGGTG
GTTTCGAGCT CGTCGGGCGA TCCCACCAGC GCGGGACGTA TACTCATCCG CGGTGCAGGT
ACCATCTCGG CGGGCACCTC GCCGCTGGTG GTTGTGGACG GTAACATCGG AGGAAGTTAC
AACCCGGTGG ATGTGGAGAG TATTTCGGTG CTGAAAGACG TGGCGGCGAC GGGCTTGTAC
GGTTCACGGG CGGCCAATGG GGTCATTATC GTCAATACCA AAATGGGGAA AGCGGGTAAA
ACGCAGATCT CATTCAACAA CACCCTCGGA TTTGCCCAGG CTACTACCGG CAAGTTCCGG
TTGATGGATT CGCAGGAGCT GTTCGACTTC CAGAGCACTT TCTACCCGCG CGACCCCTCT
GTATTGCGAA CCAATACCAA CTGGTGGGAC GAGGCTTTCA GGACCGGGTT TGTGAACAAC
CACAACATTT CGGCATCCGG TGGAAGTGAA AAAACTACCT ACTATGTTTC CGCCAACTAC
TACAAAGAGC AGGGCACGCA GGTCGAGAAC GACAAGACCG GCTACAACTT CCGCGCAAAC
CTGCAAACGC AGCTGACAAA GAAGCTGGCC GCCAAAGTCC TTTTCAACGG TGTGTTTAAT
AAGGATAATT ATGCCAACAG CAACACGCTG TACGACGCCT ACAACAACCT CCCGTTCGAC
CCGGCCTATG ACGAAGCCGG CGCCCCGATC GACGCGAGGA GCTATCCGGG GTGGCTGGGA
CGCGACCGGG AGAACTTCCT GCATTCCATC CAATACAATT ATTCCAAAGC GCAAAGCCTG
AATGTTTCGA CCGATGTGAA TCTTGATTAC GAGCTCACAG ACAAGATCAC GCTATCGTCG
TACAACCGGA TCAATTTCTT AAACGGCCAG AGTGCGAGCT ACAATGACAA ACGCACCAAG
CAAGGCGGTG CCAACAGCGG GGAGCTCTAT AATGGAACGA CCTACTCGAA CCGCCTGCTG
ACATCGAACC GCATCCGCTA CTCGGAGGAT TTCGGGCGGC ACGGTGTTAC CTTGCTCGGT
GTGGCCGAGG CGGAGACTAC TTATTCCAGC AGCAGCAGCG CCGCGGGTAA GGGATTGCCT
CCCGGCCGTG ATGTGATGTC CGTCGCGACA GACGTGCTCA CAAACCCTAC CGGCTTCAAC
GAGCAGGTCG CTTTCCGGAA GTTTCTGGGG CAATTGGATT ACAACTACGA CAACAAGTAT
TTCCTCGTCG GATCGTTCGT CAACGAATTC TCATCGCTTT TCGGTAAAAA CAATTCCACG
GCCAACTTTT ATCAGCTGGG CGCGTCCTGG ATATTGAGTA ATGAGGAGTT TTTGAAAAAC
AACAAAACCA TCACTTTCGC CAAGCTCCGC GCCAGCAATG GTACCGTCGG CAATGCGGAT
GGGATCAGCA ATTTCGCTTC GCTGGGCTTG TACACGATTT CGACCGATGC TTCCTACTCG
GGCCTGCCCG GTGCGGCGCC TTCGCAGAAA GGCAACCCCG ATCTGACCTG GGAGAAAATC
AAATCGTCCA ACATCGGGTT TGACCTGAGC TTCTTCAACC GCATTGATCT CGTAGTGGAT
GCTTACGTGA AAGAGGCGTC TGAGCTGCTT TATCGCAAGC CGCTGGCAGC TACCACCGGT
TACAGCTATG TTTGGGTCAA TGCAGGGTCA ATCCGTAACA AGGGGATTGA ATTCAGCCTG
ACATCTACAA ATGTGAAAGG CAAGGATTTC AACTGGGAAA CCAACCTGAA TATGGCCTTT
AACCGCAACA AGGTCCTCGA ACTGAGCGAC GGCGCTACGG TGTTCAATTC CGGCGCGCGC
CAGCCGATCG CTGTCGGGCA TAATATGGAT GAGTACAACC TGCCGATCTG GGCGGGCGTG
AATCCGGAAA ACGGCGACCC GCAGTGGGAG CGGATCGTGA AGGATGCCAA TGGCAATGTG
ACCAAGGAAC TGACCAGCAC TTACAGCCAG GCACAAACGG CCGATTCCCG TCAGTTTTCA
GGAAAAACCG CTGCACCAAA GTTCACAGGA GGTATTTCCA ATACATTGAC CTACAAGAAT
TTTACCTTAT CGGCATTCTT CAACTTCGTG TATGGCAACT GGGTGTATAA CGAGAGCCGC
GTTTACTTCG ACAACGACGG CCTTTACGAA AGCTATAACC AGATGGTGCT TGCCGAGGGA
TGGAGCCGCT GGGAAAAACC GGGCGATAAT GCGACCCACC CAAAACCCAT CGTGGGCGGT
AACAAGGATT CGAACCAATC GTCATCACGC TACCTGGAAG ACGGAAGTTA CATCCGGTTG
AGAAACGTCC GGCTGGGCTA TTCGCTGCCG GATAATCTGC TGGGCAGAAG CGGGTTTTCG
AAAGTATCGG TGTTTGTGAG CGGCGATAAC CTCTGGACCG GCACCCGTTT TTCAGGCACC
GACCCGGAAG TTTCCCTGTC ACAGGTCGAT TTGAGCTCCG GCCTATCCAG CCTCCGATAT
CCCATCAGCA AAAAATACCT TTTCGGGATC AACTTTTCCT TCTAA
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| Protein sequence | MIGLSLASAS PGIALPLAGR APSGIFQADR TVTGSVKDEK GEPLVGVTVT VKNNNAIGAT
TDLNGEFSLT IPQNLLDNAT LVFSFVGYAP METELGSQTR LDIAMNSSIS QLDQVVIVGY
SAKKVKFLSS SVSTINNEKL RDVTSNELPN LLQGKAPGVV VSSSSGDPTS AGRILIRGAG
TISAGTSPLV VVDGNIGGSY NPVDVESISV LKDVAATGLY GSRAANGVII VNTKMGKAGK
TQISFNNTLG FAQATTGKFR LMDSQELFDF QSTFYPRDPS VLRTNTNWWD EAFRTGFVNN
HNISASGGSE KTTYYVSANY YKEQGTQVEN DKTGYNFRAN LQTQLTKKLA AKVLFNGVFN
KDNYANSNTL YDAYNNLPFD PAYDEAGAPI DARSYPGWLG RDRENFLHSI QYNYSKAQSL
NVSTDVNLDY ELTDKITLSS YNRINFLNGQ SASYNDKRTK QGGANSGELY NGTTYSNRLL
TSNRIRYSED FGRHGVTLLG VAEAETTYSS SSSAAGKGLP PGRDVMSVAT DVLTNPTGFN
EQVAFRKFLG QLDYNYDNKY FLVGSFVNEF SSLFGKNNST ANFYQLGASW ILSNEEFLKN
NKTITFAKLR ASNGTVGNAD GISNFASLGL YTISTDASYS GLPGAAPSQK GNPDLTWEKI
KSSNIGFDLS FFNRIDLVVD AYVKEASELL YRKPLAATTG YSYVWVNAGS IRNKGIEFSL
TSTNVKGKDF NWETNLNMAF NRNKVLELSD GATVFNSGAR QPIAVGHNMD EYNLPIWAGV
NPENGDPQWE RIVKDANGNV TKELTSTYSQ AQTADSRQFS GKTAAPKFTG GISNTLTYKN
FTLSAFFNFV YGNWVYNESR VYFDNDGLYE SYNQMVLAEG WSRWEKPGDN ATHPKPIVGG
NKDSNQSSSR YLEDGSYIRL RNVRLGYSLP DNLLGRSGFS KVSVFVSGDN LWTGTRFSGT
DPEVSLSQVD LSSGLSSLRY PISKKYLFGI NFSF
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