Gene Dfer_2264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2264 
Symbol 
ID8225836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2786920 
End bp2787495 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content49% 
IMG OID644930100 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003086651 
Protein GI255036030 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATCA ACGAAAACAC TGCGGACGAT GACCTGATAG CCATGATCGT GAATGGTTCG 
GAGTCGGCAT TCGACTTGAT TTACGAGCGC TATTGGAAAA GATTATATAA TGAAGCCTAT
AAAAGGCTCA ACAATTCTTC TGATAGCGAA GAGATTGTCC AGGACGTATT TGTTGATCTC
TGGAAAAAAA GGGAGGTGCG GCAAATAGAT AACCTGCACG GATATTTGCT CAGCGCTGTC
AGGTACCAGG TTTTCGCAGT CTATCACAAG CGGAAAAACC TGCCTGCATT CGAGGAGCCG
CTTGATTACA TGGCGCTTTC CCACGACGCC GCCGACTCCG ACTATCTCCG GGAAGAACTG
CTGTCGGGCA TCCGGCTGTG GCTGGAAACG CTGCCCGAAA AACGGCGGGA GATTTTCAGG
TTACGTTATC TGGAAGGCCT GTCCACCATT GAAATAGCAA ACCTGCTCGA TATTTCGAGA
AAAACGGTTC AAAACCAGCT TCTTACTTCT CAGCAAAGCC TGCGGGAAAG CATCGGCAGG
CTCCTGACCG TCGCCCTGTA CTGGCTTCTG CAATAG
 
Protein sequence
MHINENTADD DLIAMIVNGS ESAFDLIYER YWKRLYNEAY KRLNNSSDSE EIVQDVFVDL 
WKKREVRQID NLHGYLLSAV RYQVFAVYHK RKNLPAFEEP LDYMALSHDA ADSDYLREEL
LSGIRLWLET LPEKRREIFR LRYLEGLSTI EIANLLDISR KTVQNQLLTS QQSLRESIGR
LLTVALYWLL Q