Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2261 |
Symbol | |
ID | 8225833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2780615 |
End bp | 2782297 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644930097 |
Product | RagB/SusD domain protein |
Protein accession | YP_003086648 |
Protein GI | 255036027 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAA TAATCTATCG CAATACTTTG AAAAAAGTAA CCCTGGTCCT GTTCCTTTCC TGGATAGGCA GCGGCTGCAA TCCCGACATC CTGAAAGAAA CGCCCAAGGA TTTTTTTAGT ACGGAAAACG CGTTTACCGA TGCCAAGACA TTCCAGCTTG CCGTGAACAC CCTGTATTCC GACGCGCGCA ACTTCATTTT TAACGACAAT GGGTCCGACA ACGGCGGCTA TCCTTACCGC GAATACCTGA GAATAGGGAC GGATGTGGCG AGTGTGGGCC AGAAGCACCG TCCGTACCTG ATGGTCGACT TTTCGCTGTT CAATGCAACC CATGAGGCGG CGAGGTATTT TTGGGACAAA GCATATCAAA CGCTCATTCC GCGTGCCAAC ACCATCATCG CCAGAGCCGA AGTCCCCGGA GTCCCCTGGA AAGATGAGGC TGAAAAGAAC AAAATTATCG CCCAGGTGAG GTTTTTTCGG GCGTATGCCT ACTACACGAT CGCCAATTTG TACGGCGACG TCCCGCTCAT TACGGACGAG ATCCTCACAC CCCAATTCGA TTTCACAAGA TCCTCGAAAG AGGATATCCT GGCACTGGTC CGGCAGGACC TGGAATTCGC TTCCCAGCAT TTGCCATCCA ACCCCGCGCA AGCCGCGGAG GGCCAGTTGA CCAGCGCGGC GGCAGATATG CTGCTATCCA CGCTCTATCT CCAACTGAAA ATGCCCGATG AAGCCATTGC CGCCACCACG CGCATTATTG ACTCGGGGCA TTACAAGCTC ATGACCGAAC GGTTCGGGAG CGACCCGACC CATGACGGCC ACTTCCCGGC AGGCGGCGGC GACGTGTTTT CCGACCTTTT CTGGGAAAAC AATGCTAACC GGAGCGGAGG GAATATGGAG AGCATCTGGG TGATCCAAAC CGCCAACCGG GTGCCCGGCG GAGCGGCAGG CGCCAGCTTA TCGAGAACCT GGGGGCCGTA TTACGGAAAC CTCATCGCGC CCAATGGCAA GCAGGGAATG ACCCTGGCCG ATTCGCTCGG CGGCAGGCCG GTAGGCTACG TGCGCACAAC CAATTATTTC AATTATGACA TCTGGGCGGG CGACAACAGA AATGATATGC GAAACTCACC CTGGAACATC AAGCGCGACT GGTATTACAA CAACAAATCC AACCCGCTTT ACGGCCAAAA AGTCGATTTC AAAGCCCCGG GCCTGATCGA TACCATCCAA TTCATTTACC CGATGGTGCG GAAAGGGGAG GGCGTGATCG AAAGCATCAA CAGCAGCTCC ACGCCCGACT ACAAATTTAT CGTGTACAGG CTGGCCGAGG CGTACCTGAT CCGGGCGGAA GCACATTGGA TGAAGGGCGA TCTGGCAGCG GCAGCACTCG ACATTAACCA GCTGCGTTCG AGGGCAAAGG CTAAGCCTGT CACACCCGCG CAGATAAACA TCGCCTACAT CCTCGACGAA CGCGCCAGGG AGTTGATCAT CGAAGAACCC CGGAGGATTA CATTGAACCG CCTGGGCCTT TGGTACGAAC GCACGAAGCA ATACAGCATG GACGAGCCCG CGTTTTTTCA CCTTACCAAA AAATCCATCC GGCCGCATCA TGCCCTGTTC CCCGTACCGC AAACAGCGCT GGACGCCACT CCGGGCCTCG GCCAGAACGA AGGTTACCAA TAG
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Protein sequence | MMKIIYRNTL KKVTLVLFLS WIGSGCNPDI LKETPKDFFS TENAFTDAKT FQLAVNTLYS DARNFIFNDN GSDNGGYPYR EYLRIGTDVA SVGQKHRPYL MVDFSLFNAT HEAARYFWDK AYQTLIPRAN TIIARAEVPG VPWKDEAEKN KIIAQVRFFR AYAYYTIANL YGDVPLITDE ILTPQFDFTR SSKEDILALV RQDLEFASQH LPSNPAQAAE GQLTSAAADM LLSTLYLQLK MPDEAIAATT RIIDSGHYKL MTERFGSDPT HDGHFPAGGG DVFSDLFWEN NANRSGGNME SIWVIQTANR VPGGAAGASL SRTWGPYYGN LIAPNGKQGM TLADSLGGRP VGYVRTTNYF NYDIWAGDNR NDMRNSPWNI KRDWYYNNKS NPLYGQKVDF KAPGLIDTIQ FIYPMVRKGE GVIESINSSS TPDYKFIVYR LAEAYLIRAE AHWMKGDLAA AALDINQLRS RAKAKPVTPA QINIAYILDE RARELIIEEP RRITLNRLGL WYERTKQYSM DEPAFFHLTK KSIRPHHALF PVPQTALDAT PGLGQNEGYQ
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