Gene Dfer_2261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2261 
Symbol 
ID8225833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2780615 
End bp2782297 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content55% 
IMG OID644930097 
ProductRagB/SusD domain protein 
Protein accessionYP_003086648 
Protein GI255036027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA TAATCTATCG CAATACTTTG AAAAAAGTAA CCCTGGTCCT GTTCCTTTCC 
TGGATAGGCA GCGGCTGCAA TCCCGACATC CTGAAAGAAA CGCCCAAGGA TTTTTTTAGT
ACGGAAAACG CGTTTACCGA TGCCAAGACA TTCCAGCTTG CCGTGAACAC CCTGTATTCC
GACGCGCGCA ACTTCATTTT TAACGACAAT GGGTCCGACA ACGGCGGCTA TCCTTACCGC
GAATACCTGA GAATAGGGAC GGATGTGGCG AGTGTGGGCC AGAAGCACCG TCCGTACCTG
ATGGTCGACT TTTCGCTGTT CAATGCAACC CATGAGGCGG CGAGGTATTT TTGGGACAAA
GCATATCAAA CGCTCATTCC GCGTGCCAAC ACCATCATCG CCAGAGCCGA AGTCCCCGGA
GTCCCCTGGA AAGATGAGGC TGAAAAGAAC AAAATTATCG CCCAGGTGAG GTTTTTTCGG
GCGTATGCCT ACTACACGAT CGCCAATTTG TACGGCGACG TCCCGCTCAT TACGGACGAG
ATCCTCACAC CCCAATTCGA TTTCACAAGA TCCTCGAAAG AGGATATCCT GGCACTGGTC
CGGCAGGACC TGGAATTCGC TTCCCAGCAT TTGCCATCCA ACCCCGCGCA AGCCGCGGAG
GGCCAGTTGA CCAGCGCGGC GGCAGATATG CTGCTATCCA CGCTCTATCT CCAACTGAAA
ATGCCCGATG AAGCCATTGC CGCCACCACG CGCATTATTG ACTCGGGGCA TTACAAGCTC
ATGACCGAAC GGTTCGGGAG CGACCCGACC CATGACGGCC ACTTCCCGGC AGGCGGCGGC
GACGTGTTTT CCGACCTTTT CTGGGAAAAC AATGCTAACC GGAGCGGAGG GAATATGGAG
AGCATCTGGG TGATCCAAAC CGCCAACCGG GTGCCCGGCG GAGCGGCAGG CGCCAGCTTA
TCGAGAACCT GGGGGCCGTA TTACGGAAAC CTCATCGCGC CCAATGGCAA GCAGGGAATG
ACCCTGGCCG ATTCGCTCGG CGGCAGGCCG GTAGGCTACG TGCGCACAAC CAATTATTTC
AATTATGACA TCTGGGCGGG CGACAACAGA AATGATATGC GAAACTCACC CTGGAACATC
AAGCGCGACT GGTATTACAA CAACAAATCC AACCCGCTTT ACGGCCAAAA AGTCGATTTC
AAAGCCCCGG GCCTGATCGA TACCATCCAA TTCATTTACC CGATGGTGCG GAAAGGGGAG
GGCGTGATCG AAAGCATCAA CAGCAGCTCC ACGCCCGACT ACAAATTTAT CGTGTACAGG
CTGGCCGAGG CGTACCTGAT CCGGGCGGAA GCACATTGGA TGAAGGGCGA TCTGGCAGCG
GCAGCACTCG ACATTAACCA GCTGCGTTCG AGGGCAAAGG CTAAGCCTGT CACACCCGCG
CAGATAAACA TCGCCTACAT CCTCGACGAA CGCGCCAGGG AGTTGATCAT CGAAGAACCC
CGGAGGATTA CATTGAACCG CCTGGGCCTT TGGTACGAAC GCACGAAGCA ATACAGCATG
GACGAGCCCG CGTTTTTTCA CCTTACCAAA AAATCCATCC GGCCGCATCA TGCCCTGTTC
CCCGTACCGC AAACAGCGCT GGACGCCACT CCGGGCCTCG GCCAGAACGA AGGTTACCAA
TAG
 
Protein sequence
MMKIIYRNTL KKVTLVLFLS WIGSGCNPDI LKETPKDFFS TENAFTDAKT FQLAVNTLYS 
DARNFIFNDN GSDNGGYPYR EYLRIGTDVA SVGQKHRPYL MVDFSLFNAT HEAARYFWDK
AYQTLIPRAN TIIARAEVPG VPWKDEAEKN KIIAQVRFFR AYAYYTIANL YGDVPLITDE
ILTPQFDFTR SSKEDILALV RQDLEFASQH LPSNPAQAAE GQLTSAAADM LLSTLYLQLK
MPDEAIAATT RIIDSGHYKL MTERFGSDPT HDGHFPAGGG DVFSDLFWEN NANRSGGNME
SIWVIQTANR VPGGAAGASL SRTWGPYYGN LIAPNGKQGM TLADSLGGRP VGYVRTTNYF
NYDIWAGDNR NDMRNSPWNI KRDWYYNNKS NPLYGQKVDF KAPGLIDTIQ FIYPMVRKGE
GVIESINSSS TPDYKFIVYR LAEAYLIRAE AHWMKGDLAA AALDINQLRS RAKAKPVTPA
QINIAYILDE RARELIIEEP RRITLNRLGL WYERTKQYSM DEPAFFHLTK KSIRPHHALF
PVPQTALDAT PGLGQNEGYQ