Gene Dfer_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2260 
Symbol 
ID8225832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2779166 
End bp2780593 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content52% 
IMG OID644930096 
Producthypothetical protein 
Protein accessionYP_003086647 
Protein GI255036026 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAAA ATATTGACAA TTACATAATG AGAACACTGA TATATGCATT GCTGTGCATT 
GCCGGCGCGA TTACGGCCTG CGCCCAGCCG GTAGCGCAGC AAACCGAAGT CCGCAAAGTA
GATGGTTACA AGGGAATCTG GTTTACCCTC GGGCAGCGCT CCGAATATGG GGATAAATAC
TCCGGCGGGC TCGGCACATA CACCGCCAAG CATATACCGC TTTCGATCTA CGCGCCAAAG
GTGAACAAAA CCTTTTTCGT TTACGGCGGC ACCACCGGCC CGGACCAGCG ATACCTGCTG
TGCATGATCG GTTCTTTCGA TCACAAGACC GGCACGGTGA GCAAGCCAGT GGTGGTTTAT
GACAAAAAGG GCGTAGACGA CCCCCACGAT AATCCAAGCC TTGCGATGGA CGATGACGGC
TACCTTTGGG TATTTGTAAG CGGCAGGGGG AAAGTCAGGC CCGGGTTCAA ATACCGCAGC
AAACTTCCAT ACAGCACGGA TGGGTTTGAG GTGATCCGGG AAGAAGAAAT GACCTATCCG
CAACCGAAAT ACATCAGCGG AAAAGGCTTC CTGCACCTTT TTACGAAATA TACCGGTGTC
CGGGAGTTGT ATTTCGAAAC CAGCAGGGAC GGGGTGACCT GGACGGACGA TGTGAAGCTC
GCTGGCATGA AACGGCCCGA AGACAAAAAC AGCGGGCATT ACCAGATCAG CGGGCAGCAC
GGGGAGAAGG TCGTGTTTTT TTTTAACTGG CACCCCAACG GCAACGTTGA CCAGCGCACC
AACATTTACT ATTTACAAAC CACCGACTTC GGAAAGACCT GGACAGACGT GGAAGGAAAC
GCCGTTCAGA TTCCCGTCAC CGACCCGGCG TCGCCCATTA TGCTGAGGGA ATATTACAGC
AAAAAGCAAA ATGTCTATAT CAAGGATGTG AATTTTGACG AAAAAGGTAA TCCGATCGCG
CTCCACGTGT CGGGCACCGG CCACCAGCCG GGACCGCACA ATGGATTGAA GGACTGGTCG
ATTTTGTATT ACAATGGCAA AACGTGGGAA GACCACAAAA TCACCACTTC CGATCACAAC
TATGACACGG GAAGCCTGTT CGTCAAAGGG AATGAATGGA CGGTAGTGGC GCCGACGGAG
AACAGCCCCC AAAAATGGGG AGGAGGCGGC GAAATAGAAA TGTGGAAGAG CACCGACAAA
GGCAAAACCT GGAAAAAAAC CAGACAACTC ACCAAAAACA GCCCGCGAAA CCACAATTAT
GTCAGAAAGG TGGTAAACGG CCGCGACCCT TTCTACTACT TCTGGGCCGA CGGCAACCCC
GACAAGCTGA GCGAATCGCT GCTGTATTTC GGCGACAGCA AGGGGAATGT TTGGCAATTG
CCCTATGACA TGCCGGCTGA ATCGGCTAAG CCTGCAAAAA TGAAATAA
 
Protein sequence
MIQNIDNYIM RTLIYALLCI AGAITACAQP VAQQTEVRKV DGYKGIWFTL GQRSEYGDKY 
SGGLGTYTAK HIPLSIYAPK VNKTFFVYGG TTGPDQRYLL CMIGSFDHKT GTVSKPVVVY
DKKGVDDPHD NPSLAMDDDG YLWVFVSGRG KVRPGFKYRS KLPYSTDGFE VIREEEMTYP
QPKYISGKGF LHLFTKYTGV RELYFETSRD GVTWTDDVKL AGMKRPEDKN SGHYQISGQH
GEKVVFFFNW HPNGNVDQRT NIYYLQTTDF GKTWTDVEGN AVQIPVTDPA SPIMLREYYS
KKQNVYIKDV NFDEKGNPIA LHVSGTGHQP GPHNGLKDWS ILYYNGKTWE DHKITTSDHN
YDTGSLFVKG NEWTVVAPTE NSPQKWGGGG EIEMWKSTDK GKTWKKTRQL TKNSPRNHNY
VRKVVNGRDP FYYFWADGNP DKLSESLLYF GDSKGNVWQL PYDMPAESAK PAKMK