Gene Dfer_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2250 
Symbol 
ID8225822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2766619 
End bp2767353 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content51% 
IMG OID644930086 
ProductNUDIX hydrolase 
Protein accessionYP_003086637 
Protein GI255036016 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA AAGTTACAGC CGGGCTGAAT TGGGACAGCA TTGATTTCGA TAAACACTTT 
TTGCCAGGAC TATCGGTGGA TACGGTCATT TTCGGCTTTC ACGACAACGG GCTGATGGTG
CTGCTGCTGC GGTACAAAGG CACCGATGCG TATGCGCTGC CCGGCGGCTT CATTTATCAC
GACGAAAGTG GCGAGGATGC GGCCAAGCGG GTATTGCAGG AGCGAACGGG CCTGTCCGAC
ATTTTCCTGG AACAGTTTCA GACATTTTCC GACACCGGCC GCAGCGATCC TCATTTTTTC
AAAGACATTA TGGCTGCCAG GGGTTTGAAA CCCGCCGAAA ACCATTTCCT GCTCAGGCGT
TTCGTGTCAA TCGGATATTA TGCGCTGGTG GATTATGCCA AAGCAGTGCC GACCTCGGAC
GATGCTGCCG ACGAATGCAC CTGGCATGAC CTGAACAATC TCCCGCATTT GATCCAGGAC
CATAGCCGGA TCATCGAAAC GGCGTTGATT ACCCTGCGCG AAGACCTGAA CAAGAAGTTG
GTCGGCTTTA ACCTCCTGCC CGACACATTC ACGATCAGTG AACTACAAGC GCTATACGAG
ACTGTTTTGG AGAAAAAATT CCTGCGGACG AGTTTTCAGC GGACCATGCT GAGCCTGGGT
GTATTGGAAA TGGTATCCAA AAAAACCGGT GTAGCGCACA AGTCACCATA TTTGTACCGG
TTTGTGAAAG ATTAG
 
Protein sequence
MTEKVTAGLN WDSIDFDKHF LPGLSVDTVI FGFHDNGLMV LLLRYKGTDA YALPGGFIYH 
DESGEDAAKR VLQERTGLSD IFLEQFQTFS DTGRSDPHFF KDIMAARGLK PAENHFLLRR
FVSIGYYALV DYAKAVPTSD DAADECTWHD LNNLPHLIQD HSRIIETALI TLREDLNKKL
VGFNLLPDTF TISELQALYE TVLEKKFLRT SFQRTMLSLG VLEMVSKKTG VAHKSPYLYR
FVKD