| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2245 |
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| Symbol | |
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| ID | 8225817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2754898 |
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| End bp | 2758020 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644930081 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003086632 |
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| Protein GI | 255036011 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.184688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGTT TTTCTACCTC AAAAGCCAGG CCGCTGCACA TTGTGCGGCA GTTGTGCCTG
GCCGGTGCAT TAGTATGCAC CCAACACCTG GAAAGCCAGG CCCTGACGCT CACGGCAGCG
CACCAAAGCC TTCGCGACAT CGAGGGTACC GTTCGGGATG AAAATGGCGA ACTGCTTCCC
GGCGTCAGCA TTATCGTCAA AGGCACGCAA CGCGGCGCAG TAACCGATGC AGCCGGTCGT
TTTTCGGTTT CCATTAATGA AGGCGAAGAT GCGTCGCTCG TGTTTTCCTT CGTTGGCTAC
CAGTCACAGG AGGTGCTCAT CGGCAACCAG TCCACGATTG ATGTTACTTT AAAAGCGGAT
TCCAAATCAC TGGACGAAGT GGTGGTAATC GGCTATGGTA CAGCGCGGAA GAGCGATCTG
TCAGCGGCTG TTTCCACCGT TCCCGACATG GCGCAGATCA AAAACCGGCC TGTATTGAAT
GTTGAAAGCA TGATCCAGGG CAAAATACCG GGCGTCACCT CTGTAAGCAG CGGCGGGCAT
CCGAATGAAG CACCTAAGGT GACAATCCGC GGAATGGGCT CCCGCAGCGG TGAAAGCGTT
CTTTATGTGG TCGACGGTGT GCCCGGAGCG CCATTTAACC CGGCCGACGT GGAGTCCATG
ACCGTTTTGA AAGATGCCGC TTCGGCAGCG ATTTACGGGG CGTTTTCGGG ATCTGCCGGA
GTAATTCTCG TGACCACCCG CCAGGCGGCG CAAGGCAAGC CGAGTATCGA ATACAGTGGT
TTTGTGGGTG CCAAGCAGGC CTGGCGAACC CCTCAGTCGC TGAGCGCCGA AGAGGAAGCC
CGGGTTTCGA ACCTTGCGTA TACCAATGCG GGTTTATCAC CGCTCGACGG CTGGGATGCC
TCGAAGAACC CTTACGCGCA GGTAACCCGC ACCAACTGGG TGGACGAAGT GTTCCGCACG
GGCATTATCC AGCGGCATAA TGTGAGCATC AATTCGGGGA CCGAGAAGTT TTCGACCCTC
ATCCAGGGAC GCTATGAAAA GGACGAAGGA ACGCTCCTGA ACACTTACAA CCAGAATTTG
TCTCTGCGCC TCAACGCAAA CTATCAGTTT AATGACCATC TGAAATTCAG ACAGGACGTT
TTCTGGAATA ACAACGACAA CCGCGGCACC GAAACCAACA GCGGGTACAG CGGCACGATC
TTGTCGGCGA TTTACATGCC CCGCTCGGCA GCTGCCTACT ACGAGGACGG AAGCTTCGGC
GGGGTAGGAC CGCGCGATAG CCAGTACCTG GGTATCCACG GAGATGCGAT TAACCCCGTA
GGGACGTTGG AAAGGAACAA TCCTTACAAC AAAACCACCC AGATCCAGTC GGTGTCGGAG
CTGACTTACT CGGATCTCAT TCCCGATCTG ACCGTCTTCT CGCGTTTCAC CTACCGCCAG
TCCAACTGGC TCTGGAAGCG TTTCGACCCG CGCCGGACAG AACCGGGAAA GCCTAACAAT
CAGAACAACC TCGAATACAA GACGAACCGC AATTACCACT GGATTTGGGA GAACACCGCC
AGCTACAATA AGGTGCTCGG CAAGAACAGC ATTGGCGCAA TGGTGTCGGT GACAGCCCAG
GACAATGGCG AGCGCGGCTA CACGGCCGGT GCAAAAGGTT TTGAAAATGA AGATATGTGG
GCCAACTACT TCATCAACGC AACGATTTTT GACCAAAACC GCCCGACTGA TTACGAATGG
AAGGACAAAA ATGCCTCTTA CGTAGGTCGT CTCTCTTACA GCTGGGCCGA CCGCTATTTC
GTAACGGGTA GTTACCGCTT CGACATCGCC GGACGTTTGG CGGCGGGCTA TCGCGGCAAA
GGGTTTCCCG GCGTAACCGG TGCCTGGAAA ATCAGCTCGG AGCCGTTTAT GAACAGCATT
CCGCAGATTG ATCTGCTCAA ACTCCGCGCA AGCTGGGGCC GCATCGGAAA CATCGGGTCC
ATCGCCCGCT ATTACGGTTA CCCGAGCCTG AGCACCAACA ACACCTACCA AATCGGGAAT
ACCGCGCCAT TCAGCAATGG TTTGTATGTG AATGCGCGCT TCAATCCCGA ACTTTCCTGG
GAAACTTCGC AGCAGACGGA CATCGGTCTG GATGTGAGTG TATTGAAAGA AAAGCTCTCT
TTAACGGTCG ACTATTTCGA CAAACTGACC TACGACCTGA TCAAGCAACA GGATTCGGGG
TGGCCGAACA CATTCGGTTA CGGCGCGCCT TATATCAACC AGGGTAAAAT CAGGAATACC
GGCTGGGAAT TTTCGGCCTC CTGGAAAGAC CGTGTGAACG ACTTCACCTA CGAAGTGAAC
GGAAACCTGG CTACCCTGAA AAACCGGGTG GATTACATCG ACGGCAACAC GAACTCTTTC
TGGGCACATA CCGATTCGTG GAGAGGTATC CTCACGCCCT ACCGCTCGGT GGTCGGCCAG
CCTTACTATT CTTACTGGCT GATCAAAAAT GCCGGCATTT TCCAGACAGA CGAAGAGGCC
GCGGCCTACA CCGCCGCCAA CGGAACGCGC ATTCAGCCGA ATGCCAAAGC GGGTGACCTT
AAATTCATCG ACGAAAACGG CGACGGCAAA ATCGACGACG GCGACCGTGT GTTCATGGGA
AGCGCATTCC CGAAAATTAC TTACGGCGTA ACAGCCAATG TAAGCTGGAA GAACTTCGAT
GCGAGCCTCT TCTTGCAGGG CGTCGGCGGC GTGAAGCTTT TCCATGCATT CAAGCAGTCG
ACTTTGAACG GGGCCGAGCA AGGATACAAC CGGTGGGACA AAATCCTGGA CGCCTGGTCG
GAAACCAACA CCGGATCGGA CATTCCACGC ATTCAGGCCA ACGACCCGAA CCGCAACTTT
GCGACCAACT CCGACTGGTA CCTCGAAAAC GGGAACTACC TCCGTATCAA AAACCTGATG
ATCGGTTATA CGTTCAAGAA AATCAAGGGA ATCGAGAACC TGCGCGTGTA TGTAAGCGGC
GATAACCTGC TGACATTCAC CAAATATTCG GGTATGGACC CCGAGGTGGG CGGCATCGGC
TTCGACGGCG GACAGTTCCC CGTGTCGCGC GTTTACTCTG CCGGTTTGAG ATTGAAATTC
TAA
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| Protein sequence | MLRFSTSKAR PLHIVRQLCL AGALVCTQHL ESQALTLTAA HQSLRDIEGT VRDENGELLP
GVSIIVKGTQ RGAVTDAAGR FSVSINEGED ASLVFSFVGY QSQEVLIGNQ STIDVTLKAD
SKSLDEVVVI GYGTARKSDL SAAVSTVPDM AQIKNRPVLN VESMIQGKIP GVTSVSSGGH
PNEAPKVTIR GMGSRSGESV LYVVDGVPGA PFNPADVESM TVLKDAASAA IYGAFSGSAG
VILVTTRQAA QGKPSIEYSG FVGAKQAWRT PQSLSAEEEA RVSNLAYTNA GLSPLDGWDA
SKNPYAQVTR TNWVDEVFRT GIIQRHNVSI NSGTEKFSTL IQGRYEKDEG TLLNTYNQNL
SLRLNANYQF NDHLKFRQDV FWNNNDNRGT ETNSGYSGTI LSAIYMPRSA AAYYEDGSFG
GVGPRDSQYL GIHGDAINPV GTLERNNPYN KTTQIQSVSE LTYSDLIPDL TVFSRFTYRQ
SNWLWKRFDP RRTEPGKPNN QNNLEYKTNR NYHWIWENTA SYNKVLGKNS IGAMVSVTAQ
DNGERGYTAG AKGFENEDMW ANYFINATIF DQNRPTDYEW KDKNASYVGR LSYSWADRYF
VTGSYRFDIA GRLAAGYRGK GFPGVTGAWK ISSEPFMNSI PQIDLLKLRA SWGRIGNIGS
IARYYGYPSL STNNTYQIGN TAPFSNGLYV NARFNPELSW ETSQQTDIGL DVSVLKEKLS
LTVDYFDKLT YDLIKQQDSG WPNTFGYGAP YINQGKIRNT GWEFSASWKD RVNDFTYEVN
GNLATLKNRV DYIDGNTNSF WAHTDSWRGI LTPYRSVVGQ PYYSYWLIKN AGIFQTDEEA
AAYTAANGTR IQPNAKAGDL KFIDENGDGK IDDGDRVFMG SAFPKITYGV TANVSWKNFD
ASLFLQGVGG VKLFHAFKQS TLNGAEQGYN RWDKILDAWS ETNTGSDIPR IQANDPNRNF
ATNSDWYLEN GNYLRIKNLM IGYTFKKIKG IENLRVYVSG DNLLTFTKYS GMDPEVGGIG
FDGGQFPVSR VYSAGLRLKF
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