Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2235 |
Symbol | |
ID | 8225807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 2744270 |
End bp | 2745691 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644930071 |
Product | transcriptional regulator, GntR family with aminotransferase domain |
Protein accession | YP_003086622 |
Protein GI | 255036001 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.71743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGAC CATGGAATAT CGATATTGTA CTGGATGACC AGTGCGGCAA AGCGATTTAT TTGCAGATCG CCGACGCGAT TATCCGGGAT ATCCAGTCGG GCCGGCTCAA AGGCGGCGAG GCGCTACCCG GCAGCCGCCA TCTGGCGCAG GTGCTGAATG TGAACAGAAA TACGGTTGTA GAGGCTGTGG ATGTGCTGTT GACCGAGGGA TGGCTGGTTT CCAGGGAAAG GCGGGGCACG TTTGTGGCGG AAAAGCTGCC CAGCCTCCGG GGCGCGAAGG TACCGCTCCC CAAAACGACC CCGGCAGCGC CGCTATTGAA CAAATACCAG ATCCAGTTCG ACGACGGCCA CCCGAACAGC AAGATCGCGC CGGTAGCAGA GCTGGCGAGG GCTTACCGGC AGATTTTCCA GCGAAAAGCC CGCTGGCAGA TGATGTCCTA TGTGGATGCC CTGGGCGACA TTGATTTTCG GAGGGAAATT GCTCAGATGC TCAGTCATCA GCGAAGCATG CAGGTGACCG AAAACGACCT CTGCGTGACC AGGGGCAGTC AGATGGCCAC TTACCTGACG GCGCAATGCC TCTTGCAGCC GGGTGATTAT GTGATGATCG AAAACCCGGG TTACAAGCCC GCATGGTCGG CTTTCGAGCA AGCCGGCGCC CGGTTACTGC CGGTGCGTGT GGACCAGGAC GGCTTGTCCA TCGACGAAGT GGCAGCCTAT CTCAAAACCT ACCCGGGCCA GGTGAAGGCG ATATTTACCA CGCCGCACCG CCAGTACCCG ACGACGGTCA CGCTCAGCTT GCACCGGAGG CTGGAATTGA TCCGCCTGTC CAACGAGCAC GGATTTAAAA TCATTGAAGA CGATTATGAC AACGAGTTTC ATTTCGGACA CCGGCCAATA CATCCGGTTT GCGCATTTCC GGGGCTTCGG AATTACGTTT ACATCGGAAC GCTCAGCAAG GTGGTTGCGC CCGCATTGCG GATAGGCTAC CTGGTGACCA ATGATCAGGA ACTGCTGCAC AAGGTGAGTG ACCTCCGGAA GATTATCGAT GTGCAGGGCG ATACGATCAT GGAGCAGGTG ATCCTCCAAC TGATCAAGGA CGGCACCATC AGAAGGCACA TCCGCAAGGC CTCCCAGTAT TACAGGGCAA AAAGGGACTT CACCGTGTCG CTGATCGACA AATACCTGGG AGGAAAAGTG ACTTACACGG TTCCCGAAGG TGGACTGGCG TTCTGGATCG TGCCGCATCG GCCGGTGAGC TGGGAGGATA TTACTTCCAA AATGCACTCG CAAGGGATTT TAATCATCAA TCCCGATACT TTCAGTCTGG GAGAATCCGC GAACGGGTTT CGGCTTGGTT ACGGCTCGCT GTCCGAACAA CAGCTCGAAG AGGGCATTAA AGCCATTTCA AAATTGTTGT GA
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Protein sequence | MLRPWNIDIV LDDQCGKAIY LQIADAIIRD IQSGRLKGGE ALPGSRHLAQ VLNVNRNTVV EAVDVLLTEG WLVSRERRGT FVAEKLPSLR GAKVPLPKTT PAAPLLNKYQ IQFDDGHPNS KIAPVAELAR AYRQIFQRKA RWQMMSYVDA LGDIDFRREI AQMLSHQRSM QVTENDLCVT RGSQMATYLT AQCLLQPGDY VMIENPGYKP AWSAFEQAGA RLLPVRVDQD GLSIDEVAAY LKTYPGQVKA IFTTPHRQYP TTVTLSLHRR LELIRLSNEH GFKIIEDDYD NEFHFGHRPI HPVCAFPGLR NYVYIGTLSK VVAPALRIGY LVTNDQELLH KVSDLRKIID VQGDTIMEQV ILQLIKDGTI RRHIRKASQY YRAKRDFTVS LIDKYLGGKV TYTVPEGGLA FWIVPHRPVS WEDITSKMHS QGILIINPDT FSLGESANGF RLGYGSLSEQ QLEEGIKAIS KLL
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