Gene Dfer_2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2214 
Symbol 
ID8225786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2712308 
End bp2713624 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content55% 
IMG OID644930050 
Productglutamate dehydrogenase 
Protein accessionYP_003086601 
Protein GI255035980 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.171409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.223248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGA TCATCCATCG GAATCCCGGC GAAAATGAAT TCCATCAGGC AGTCCATGAG 
GTCGCCGAAA CCATCATTCC ATTCATTGAC AGTCATCCGC AATACCAGAA GGCCAAGATT
CTCGAAAGAA TCGCAGAGCC TGAGCGGGTT ATCATTTTCA GGGTTCCCTG GATGAACGAC
CAGGGCGAAG TGGAAATCAA CCGCGGATAC CGTATTCAGA TGAACAGCGC GATCGGTCCT
TACAAAGGCG GTCTTCGTTT TCACCCTTCG GTAAACCTGA GCACGCTCAA ATTTCTTGCT
TTCGAACAAA TATTTAAGAA CAGCCTCACG CAGCTTCCCA TGGGGGGCGG AAAAGGAGGG
GCCGATTTCG ATCCGAAAGG ACGGTCCGAC CGCGAGGTAA TGTTCTTCTG CCAGAGCTTC
ATGACCGAGC TGTTCCGTCA CATCAGCTCC GACAACGACG TGCCCGCGGG CGATATCGGT
GTAGGTGCAA GGGAAATCGG TTTTCTTTTC GGTCAGTACA AGCGGCTCAA AAACGAATTT
ACCGGGGTAT TGACCGGCAA AGGCGCCAGC TACGGCGGAA GCCTCATCCG GCCCGAAGCT
ACGGGCTACG GCGTGGTGTA CTTTGTGCAG CAAATGCTCA ACCAGCGGCG CGACAGCCTG
AAAGGCAAAC GCGTGGTCAT TTCAGGATCG GGTAACGTGG CGCAATACAC GCTCGAAAAG
TGTATCGAAC TCGGTGCAAA AGTGGTGACA CTGTCCGACT CATCGGGATA TATCTACGAC
GAGCAGGGTA TCGACGCCGA GAAATTCGCC TACATCATGC GTCTTAAAAA CGAAGAGCGC
GGCCGGATCG ACTCTTATGC TGCCAGGTTT GGATGTGAAT TTGTAGCCGG CAAAACGCCG
TGGGAAGTGC CATGCGATAT TGCGCTACCC AATGCCACCC AAAACGAGCT GAATGCGGAC
GACGCCCGTT TGCTCGTTAA AAACGGTTGT TTCTGCGTGG CCGAAGGCGC CAATATGCCT
TGCACGCCGG AAGCGATTGA GGTTTTCGAA AGCAACGACA TCCTGTATGC GCCCGGAAAG
GCGGCTAATG CGGGAGGTGT AGCGGTGTCT GGCCTTGAAA TGTCGCAAAA CTCGCTGCGC
CTGTCGTGGT CACGCGAGGA AGTGGACAAG AAATTGCAGG ATATCATGCT GAACATCCAT
TCGACCTGCC TGCGTTACGG GCGGCGACCG GACGGACGCC TGAGCTACAT GCAGGGCGCC
AATATCGGAG GCTTCGTGAG AGTAGCCGAC GCCATGCTCG CACAAGGGCT CGTATAA
 
Protein sequence
MSGIIHRNPG ENEFHQAVHE VAETIIPFID SHPQYQKAKI LERIAEPERV IIFRVPWMND 
QGEVEINRGY RIQMNSAIGP YKGGLRFHPS VNLSTLKFLA FEQIFKNSLT QLPMGGGKGG
ADFDPKGRSD REVMFFCQSF MTELFRHISS DNDVPAGDIG VGAREIGFLF GQYKRLKNEF
TGVLTGKGAS YGGSLIRPEA TGYGVVYFVQ QMLNQRRDSL KGKRVVISGS GNVAQYTLEK
CIELGAKVVT LSDSSGYIYD EQGIDAEKFA YIMRLKNEER GRIDSYAARF GCEFVAGKTP
WEVPCDIALP NATQNELNAD DARLLVKNGC FCVAEGANMP CTPEAIEVFE SNDILYAPGK
AANAGGVAVS GLEMSQNSLR LSWSREEVDK KLQDIMLNIH STCLRYGRRP DGRLSYMQGA
NIGGFVRVAD AMLAQGLV