Gene Dfer_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2212 
Symbol 
ID8225784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2709351 
End bp2710622 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content56% 
IMG OID644930048 
Productcobalamin synthesis protein P47K 
Protein accessionYP_003086599 
Protein GI255035978 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.614725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.208807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCATT TTCGAAGTGA GCTTTATAAT TTTGCAACAT TGTTGCATAA CCATAAAGCT 
ACATTCATGA ATCAGAAAAA AATGCCCGTG ACCGTCCTCA GCGGGTTTCT CGGGGCTGGG
AAAACTACTT TGCTGAACCA CATTCTCCAT CACCGGCACG GTTTGAAAGT GGCTGTGATC
GTTAACGATA TGAGTGAGGT GAATGTCGAT GCGAGGTTGG TGGAAGGGCA GCATACGCTC
AGCCGCACGG AGGAAAGGCT CGTCGAAATG TCGAATGGCT GCATTTGCTG CACGCTGCGC
GAGGATTTGA TGGTGGAGGT GGAAAAGCTC GCCAAGGAAA ACCGCTTCGA TTACCTGCTG
ATCGAGAGCA CGGGGATTTC AGAGCCGGTG CCGGTGGCGC AAACGTTCAG TTTCGTGGAC
GAGCAGAGCG GCATCGACCT GTCGCGCTGG GCGACGATCG ACTGTATGGT GACCGTCGTG
GATGCGTACA ATTTTGCCGC GGATTTCGGA TCGCTGGATA CCATTTCCGG CCGCTCGCTG
AGCGATGGCG ACGACCACCG CACAATCGTG AACCTGCTCA CGGACCAGAT TGAGTTTGCC
AATGTCATTA TCCTCAATAA AACCGACCTC GTGCCGCATT CGAGGCTGAA AGAGCTGCAT
GCGATCATCC ATGCCCTGAA CCCCGGTGCG CGGATCATCG AGAGCAGTTT TTCAAAAGTG
GAAATCCGGG AGATCGTTAA TACCGGATTG TTCGACTACG GGCAGGCGGA GCAGTCTGCC
GGCTGGATAC GCGAGTTGGA AAAAGTAGAA AACGGCGGCC ATGTGCCCGA AACGGACGAA
TACGGCATCA GCTCTTTCGT ATTTCGCGAT GCGCGGCCTT TTCATCCCAA ACGCTTTTGG
GACTACATTC AGCAAAACTG GCCGGCGGGC ATTATCCGCA GTAAAGGGTT GTTCTGGCTC
GCATCGCGCG CCAGTCAGGC ATTGAACTGG AGCCAGGCCG GCGGGTCGGT GCGGGCCGAG
TCGGCGGGCG TATGGTGGGC CAGCATGCCG GCAGACCAGC GGCGGCGCTA CCAGGCGTAT
ATCGACAATC GAGACACGAT CGAGGCTCGA TGGGGCGAGT TTGGCGACCG GGTCAACGAG
CTGGTGCTCA TCGGACAAGA CCTGAACCAG CAGCAGATCC TGGGCGAACT CGAAGCATGC
CTCTGCACGC CGCGGGAAAT AGCGCTTATG GAGAGCGGCG CGCGCTTCGC CGACCCCTTC
CCCGGATTAT GA
 
Protein sequence
MLHFRSELYN FATLLHNHKA TFMNQKKMPV TVLSGFLGAG KTTLLNHILH HRHGLKVAVI 
VNDMSEVNVD ARLVEGQHTL SRTEERLVEM SNGCICCTLR EDLMVEVEKL AKENRFDYLL
IESTGISEPV PVAQTFSFVD EQSGIDLSRW ATIDCMVTVV DAYNFAADFG SLDTISGRSL
SDGDDHRTIV NLLTDQIEFA NVIILNKTDL VPHSRLKELH AIIHALNPGA RIIESSFSKV
EIREIVNTGL FDYGQAEQSA GWIRELEKVE NGGHVPETDE YGISSFVFRD ARPFHPKRFW
DYIQQNWPAG IIRSKGLFWL ASRASQALNW SQAGGSVRAE SAGVWWASMP ADQRRRYQAY
IDNRDTIEAR WGEFGDRVNE LVLIGQDLNQ QQILGELEAC LCTPREIALM ESGARFADPF
PGL