Gene Dfer_2211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2211 
Symbol 
ID8225783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2708734 
End bp2709336 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content53% 
IMG OID644930047 
Productprotein of unknown function DUF417 
Protein accessionYP_003086598 
Protein GI255035977 
COG category[S] Function unknown 
COG ID[COG3059] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.510036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.18844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTT CCATCATAAA CAGTATCGCG AATCTCGACC AGTTGGGGAA AAAGCTGGTG 
CGCTTTGGCA TCGTTGTCGT GTTCCTTTGG ATCGGCGGGC TTAAATTCTT CACCTACGAG
GCCGACGGCA TTGTACCGTT TGTAGCCAAT AGTCCGTTCA TGTCCTTCTT TTACAGCCAT
CCGGGCGATT ATAAAAGTCA CATGAACAAG GAAGGTGAGC TCATCCCGGC CAATCACGAG
TGGCATATCG CCAACAATAC CTATGGCTTT TCCTACGCGC TGGGTACATT TCTGGTGCTC
ATGGCCGTGC TCGTAGCTTT GTACAAGGTT GCGCCGCTGC CGAGTCTGGT GGCGAGCCTG
CTGATTTTCA TCATGACGCT CGGCACGCTG TCCTTCCTGA TCACCACGCC CGAAGCCTGG
GTGCCTTCGC TGGGCGACGC ACAATCGGGG TTCCCCTACT TGTCGGGGCG AGGGCGGCTG
GTAATCAAAG ACCTGGTCAT CCTGGGTGGC GCCATCATCA CCATGAGCGA AACGGCAAGG
ATTTACCTGG ATCGCCAAAA GTCAAAAAAT CAATTCAAGG TGCAACTCAC GGAACCGCAT
TGA
 
Protein sequence
MKTSIINSIA NLDQLGKKLV RFGIVVVFLW IGGLKFFTYE ADGIVPFVAN SPFMSFFYSH 
PGDYKSHMNK EGELIPANHE WHIANNTYGF SYALGTFLVL MAVLVALYKV APLPSLVASL
LIFIMTLGTL SFLITTPEAW VPSLGDAQSG FPYLSGRGRL VIKDLVILGG AIITMSETAR
IYLDRQKSKN QFKVQLTEPH