Gene Dfer_2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2205 
Symbol 
ID8225777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2699697 
End bp2700278 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content53% 
IMG OID644930041 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003086592 
Protein GI255035971 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATACCGG ATAACCGAAA AGTTTCTGAT CAGCAACTGC TAGAAGCTTT GCGCTCCGGG 
CACGAATGGG CATTTACCGC CATTTATGAC CAATACTGGT ACCCGCTTTA CAAGGTTGCA
CTCCACAAGC TCGGGCAAAA ACACATTGCC GAAGAGATTG TGCAGGACAT TTTCACCCGC
CTCTGGAACG AGCGGCGCAC GCTGCCGGGC ACCGCGCTGA ACTACTACCT TTTTTCGGCG
GTGCGCTTCG AGGTGATCGA CTGGATTCGC AAAGCAGGCC CCAGAAGCAG ATATTTGGCT
TACTATCAGG CATTTGCCAG CCAGGCCGAC CATTGCACCG ACGACGAGGT CGCCTACAAC
GAGCTATTGC ACAGCATTGA CGAAAGCCTC AAACCATTCC CTCCCCAAAC CCGCGAAATT
TTCAAACTCA GCCGCATCGA AAGCTGGACG GTCGGACAGA TCGCCGAATT CATGAACCTT
TCGGATAAAT CGGTTGAATA CCATCTCGGC AAAGCTTCCA AAGCTGTGCG GGAATATCTG
AACGAAACCA TGCTCATCCT CCTGCTAAGC TTCCTTGCCT GA
 
Protein sequence
MIPDNRKVSD QQLLEALRSG HEWAFTAIYD QYWYPLYKVA LHKLGQKHIA EEIVQDIFTR 
LWNERRTLPG TALNYYLFSA VRFEVIDWIR KAGPRSRYLA YYQAFASQAD HCTDDEVAYN
ELLHSIDESL KPFPPQTREI FKLSRIESWT VGQIAEFMNL SDKSVEYHLG KASKAVREYL
NETMLILLLS FLA