| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2203 |
|---|
| Symbol | |
|---|
| ID | 8225775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2695668 |
|---|
| End bp | 2698943 |
|---|
| Gene Length | 3276 bp |
|---|
| Protein Length | 1091 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644930040 |
|---|
| Product | protein of unknown function DUF1549 |
|---|
| Protein accession | YP_003086591 |
|---|
| Protein GI | 255035970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTGC GGATGGAGCA GGTTGCGTTT TGGAGAAGCA GTGCGGCGGC GGCGTGTTTG
TGCGTGCTGC TGCTGGCGGC TTGCGGCGTC GAAAAGCCGG AGGCGGTGGA AGCAGCCATG
CAGGAGATAC CCGAGGAACT GGATTTTAAC TACGACGTAA AACCGATCCT GTCCGACAAA
TGCTTCGCCT GCCACGGGCC CGATACCAAA AAGCAAAAGG GCGGCTTGCG GCTCGATACC
GAAGAAGGCG CATACAGCGC ATTGAAAGAC GCGCAAGAGC GACACGCCAT CGTCCCCGGC
GACCTGGCCG CGAGCGAGGT GTACACGCGC TTCATCGCAT CCGACCCCGA ATTGAAAATG
CCCCCACCGG CTTCCAATCT CACATTATCC GCGAAAGAAA TAGCGGTACT CACCCGCTGG
ATCGAGCAGG GCGCGAAATA CAAGCCACAT TGGTCGTTCA TCAAACCCGA AAAGGCGCCA
TTGCCCAAAC CTGAAATGGC CAACTGGGCC CGGACGCCGA TTGACCATTT CATTCTGAAA
CGGCTGGACG ACGTGAAAAT GAAGCCCTCC GCCGAAGCAA CCCGTGAGGA CCTTATCCGC
CGAGTGAGTT TCGATCTTAC CGGATTGCCT CCCTCGTTGG CGGAAATAGA TGCATTCGTA
GCCGATCGAT CACCCGAGGC CTATGACAAG CTCGTGGACA GGCTGCTGAA ATCCCCTGCT
TACGGCGAAC GGATGGCGAG CGAATGGATG GACATAGCGC GCTACGCCGA CAGTGACGGT
TACCTCGACG ACAAGCACCG CGATTTTTCG CCCTGGCGCG ACTGGGTGAT CAGCGCTTTC
AACCGCAATT TGCCCTACGA CAAGTTTATG ACAATGCAGC TGGCAGGCGA CCTTTTGCCC
GGTAAAACGA AGGAGAGCAT TCTTGCCACC GCGTATAACC GCCTGCACAA GAAGAGCTCC
GAAGCGGGGA TCGTTTTCGA GGAGTACCGG GTCGAATACA ATGCGGACCG TGTGCAAACG
GTGGGGCAGG GCGTAATGGG CCTTTCGCTC CAATGCGCCC GCTGCCATGA TCACAAATAT
GACCCGATCA GCCAGGAGGC ATACTATAAG ATGTTCGGGC TGTTCAATAG CACCAACGAA
ACGGGCAGCC CCGTGTATGG CCCCGACCAG ACCCCCGGCC CCGCATTGCT GCTCACCACG
AGTGAAAACG AGGCAATGCT CCGGTTTTTC GACCGGCAGG TTACCGGCCT CAGCAACCGG
CTTGAAAATG AAGCCAAAGC CGAGGGAAGC GATTTCGACA AATGGCTGCA CGGCGGAAAG
CTCTCGGCCA AACTGCTGGA CCAGAAAGCG CGTGAAGGAC TGGTTGCATC CTACTCTTTT
GACAAATCAT TTAAAACCGC CGGCGGGAAG ACGGTCATGC CCAACGAGGT CCGACCAAAC
CAGCTGGCGC AATGCAACGA GCTGATTCTG AAACCCGGAG TGAAAGGGAA TGCCTATTTC
GTGTCGGATT ACAACTCCAT TAAACTGGGA AATAACATCG GCTGGCATGA AAGGACGGAG
CCGTTTTCGG TTGAATTGTG GATCAATCCG GCGAATGTGT ATCCCGACGC CGGGGTTTTC
TACCATTGCG AAGACCTGAG GCTGGGCTAC AAAGGTTACT CCTTGCGGCT GGCTGACAAT
AAGTTACAGT TCATTGTCGC GCATTCTTAC CCGCAAAACG CCATTCAGGT GAGCACGGTG
CTGGCAATGC CGGTCCGGAA ATGGACGAAG GTGACGGTCA CCTACGACGG ATCGAGCAAG
GCGGCGGGGG CGAAAATCTA TCTGAACGGC GAAGCGGCCA AAACGAAGGT CGATTTCGAT
AATCTTTATA AAGGGATTTT GTATGAAAAA GACATTCATA CTTACGGTTT TGACGGTTTC
ATGCTTGGCC AGCGCAACCT GCTGATCCCT TTCAAAGACG GAGGGATTGA TGAACTGAAA
ATTTACGACA AAGCGCTGAC GGCACTTGAA GTCCTGTATA ACTACCATCC GCAAAAAGCG
GGCGAAATGT TGAAAACGCC CGCTGCTCCG GCAAACCTGG CCATGTTGAA GGATTTTTAC
AACACCCATT TCAATGCGCG GCGACGGGTG CTCCGCGACT CGCTCAAAGC CGTTATGGAC
CGGCAGAACA AACTGGTCAA CAGCATTCCC GAGCTAATGG TGATGGGCGA CCTGCCCAAG
CCCCGGCCCA CCTACCTGCT CGCGCGCGGT GCGTACAATG CGCCCGGCAA GGAGGTAACG
CCCGGCGCTC TCGACGCGGT TATGCCCTTT GAAGGGAAAT ATCCCCGTAA CAGGCTGGGA
CTGGCCAAAT GGATTTTTGA TAAAGACAAT CCCCTCACAG CGCGTGTATT CGTGAACCGG
ATCTGGCAAA TGCATTTCGG AAACGGGATC GTGCGCTCAT CGGCCGACTT CGGCAACCAG
GGCGATTTGC CGACCCACCC GCAGCTGCTC GACTGGCTGG CCGTCGATTT TATGGAATCG
GGCTGGGATA TCAAAAGGCT GCATAAGCTG ATCGTACTGT CGGCCACCTA CCGGCAAACG
TCCCGCGTGA CGCCCGAAAA CCTCGAAAAA GATCCCGGCA ACGAGCTGCT CGCAAGGGGC
GCGCGGTTCA GGTTTACGGC GGAAATGGTG CGGGATAATG CATTGTCAAT CAGTGGACTG
CTGGTGGACA GGCTGGGCGG GGAAAGCGTG TACCCCTACC AGCCCGCGGG CCTCTGGGAC
GAGCTGAGCG ACAAGGTTTG GCGCTACAAA TACCAGCAGG AACCGGGCGA CGGGCTCTAC
CGCAGGAGCC TGTACACGAT TTGGAAAAGA ACGTCCCCGC CGCCTTCCAT GCTCATTTTC
GATGCGCCTG AACGGGGCGA ATGCGTGGCC AAACGCCGCT CTACCAGCAC GCCGTTGCAG
GCATTGGTGA TGCTCAACGA CCCGCAATAT GTGGAAGCCG CCCGCGCCCT CGCCGAACGC
GTGCTGCACG AATGTCGGCA CAACGATGCA AAGCCGGTGG ACGTGGCGTT CAGGCTGATT
ACCGGCCGGC ATCCCGATGC GAAAGAGCGG CAAATACTCG CTGATTTTTA CGCCGACGAA
CTGAAACGCT TCCGCGCCAG GCCCGCGCAG GCGCTCGAAT ACCTGAGCAC GGGCGAGCGG
AAGTGGGACA GGGCATTGCA ACCGGAGGAA ATAGCCGCTT TGGCAACGGT GTCCAACTCG
GTGATGAATA CGGATGAGGG ATATACCCGC AAATGA
|
|---|
| Protein sequence | MKLRMEQVAF WRSSAAAACL CVLLLAACGV EKPEAVEAAM QEIPEELDFN YDVKPILSDK
CFACHGPDTK KQKGGLRLDT EEGAYSALKD AQERHAIVPG DLAASEVYTR FIASDPELKM
PPPASNLTLS AKEIAVLTRW IEQGAKYKPH WSFIKPEKAP LPKPEMANWA RTPIDHFILK
RLDDVKMKPS AEATREDLIR RVSFDLTGLP PSLAEIDAFV ADRSPEAYDK LVDRLLKSPA
YGERMASEWM DIARYADSDG YLDDKHRDFS PWRDWVISAF NRNLPYDKFM TMQLAGDLLP
GKTKESILAT AYNRLHKKSS EAGIVFEEYR VEYNADRVQT VGQGVMGLSL QCARCHDHKY
DPISQEAYYK MFGLFNSTNE TGSPVYGPDQ TPGPALLLTT SENEAMLRFF DRQVTGLSNR
LENEAKAEGS DFDKWLHGGK LSAKLLDQKA REGLVASYSF DKSFKTAGGK TVMPNEVRPN
QLAQCNELIL KPGVKGNAYF VSDYNSIKLG NNIGWHERTE PFSVELWINP ANVYPDAGVF
YHCEDLRLGY KGYSLRLADN KLQFIVAHSY PQNAIQVSTV LAMPVRKWTK VTVTYDGSSK
AAGAKIYLNG EAAKTKVDFD NLYKGILYEK DIHTYGFDGF MLGQRNLLIP FKDGGIDELK
IYDKALTALE VLYNYHPQKA GEMLKTPAAP ANLAMLKDFY NTHFNARRRV LRDSLKAVMD
RQNKLVNSIP ELMVMGDLPK PRPTYLLARG AYNAPGKEVT PGALDAVMPF EGKYPRNRLG
LAKWIFDKDN PLTARVFVNR IWQMHFGNGI VRSSADFGNQ GDLPTHPQLL DWLAVDFMES
GWDIKRLHKL IVLSATYRQT SRVTPENLEK DPGNELLARG ARFRFTAEMV RDNALSISGL
LVDRLGGESV YPYQPAGLWD ELSDKVWRYK YQQEPGDGLY RRSLYTIWKR TSPPPSMLIF
DAPERGECVA KRRSTSTPLQ ALVMLNDPQY VEAARALAER VLHECRHNDA KPVDVAFRLI
TGRHPDAKER QILADFYADE LKRFRARPAQ ALEYLSTGER KWDRALQPEE IAALATVSNS
VMNTDEGYTR K
|
|---|
| |