Gene Dfer_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2201 
Symbol 
ID8225773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2692049 
End bp2694175 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content54% 
IMG OID644930038 
Productsodium/hydrogen exchanger 
Protein accessionYP_003086589 
Protein GI255035968 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.260378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTAT TGAACATCCA CATCGGGTCA CTGCCTATTG AGGACCCGGT ACTGAAATTC 
CTCATCGAGC TCATCATCAT CCTCGGTGCG CCGCTATTGC TGAACAAGAT CAAGGTGCCG
CATTTGCTCG GCTTGCTCAT TGCCGGCGCG CTCGTGGGCC CCAACGGGCT CAACCTCCTC
GCGCGCGACA GCAGCGTGGT AGTAACCGGC ACAACCGGCT TGCTGTACAT CATGTTCCTG
GCCGGGCTGG AAATCGATAT GGGCGATTTC AAGAAGAATA AATGGAAAAG CATTGGTTTT
ACGGCCTACA CATTCGCCAT TCCCTTCGTC CTCGGACTGC TGGGCGGCTA CTATGTGCTG
CGTTTCCCGA TCCTCACCAC CGTTCTTTTT GCCAGTCTAT TTTCCTCGCA CACGCTCATC
GCCTACCCGC TCGTGAGCAA GTTGGGTATT TCCAAAAACC TCTCCGTGAA CATTACCGTG
GGCGGCACAA TGCTCACCGA CGTGCTGTCC CTGCTCGTGC TGGCGGTGGT GGTCGGGATG
ACGCAGGGCG CGGTGGACAG CGCTTTCTGG ATACGCCTCA TTGTATCGGT GCTGTCATTC
AGTCTCGTGG TACTGTTCGT TTTTCCGATC ATCGGAAGGT GGTTTTTCAA ACGGGTGGAG
GACAAAATAT CGCAGTACAT TTTTGTGCTC GTGATGATTT ACCTCGCGGC TGTGCTGGCC
GAGCTGGCCG GGATCGAGGC CATTATCGGG GCGTTTTTCG CGGGGCTGGC CCTGAACCGC
CTCATTCCGC ATTCGTCGTC GCTGATGAAT CGGGTGGAAT TTGTGGGTAA TGCCATTTTT
ATCCCCTTCT TCCTGATCAG CGTGGGGATG CTCATTGATT TTAAAGTGAT TGTCAAAAGC
TGGGAAACCG TTGGGGTGGC GGCCGTGATG CTGGTGGCAT CCATCGGCGG GAAATACCTC
GCGGCGATTT TCACGCAGAA GACTTTCAAA CTCACCAAAG ACGAGGGAAT GCTGATTTTC
GGCATGAGCT CCGCGTCGGC GGCGGCTACG CTTGCGGCGG TAATGGTGGG TTACAACATC
GTCATTTCGG AAACGCCTGC GGGCGAGCCG GTCCGCCTTT TGAGCGAGCA CGTGCTCAAC
GGCAGCATTC TGCTGATCCT GATCTCCTGT ACGATCTCGT CCTTCGTGTC GATGTCGAGC
GGCGAGAAGA TCGCCGAGGC TGATAAGGAG AACACCGCCT CGGGGATTAA CCGCGAAAAC
GAGAGCATCC TGATCGCGGT GAATTATGAG GAAACGGTTG AAAAACTGGT GAATCTGGGA
CTGATGATCA AGGCAGGCCA CAACGACGAC CGTTTACTGG CGCTCAATGT CGTGAATGAT
GACAAAAACG AGTCATCGGT TAAAAACGCC GAAAAAACGC TCCACATCGC GGTCGACACC
GGTGCTGCCG CGGATGTGGC CATTCAGCAG GTGACACGCT ACGATCAGGA CGTTTCGAGC
GGCATCAGCA ATGTGATCAA GGAGCAACGC ATTACCGATC TGCTGATCGG CCTTCAACCC
GAAAAAGGAT TTACACCATC ATTTATATAC AATCTTTACA ACGGCTATTT GCAAAACGAC
AACGTAAACA CGTTGATTTA CCACGCCGCA CAGCCCATTT CCACCGTGAA GCGCTACGTG
GTACTGATTC CCGCCCGGGC CGAAAGAGAA CCGGGATTTT TCCACGCATT GCTCCGGGTA
TGGAACATCG CGAAGAATTC AAGCGCCGAA ATGAGCTTTT ACGGCGGCGA ACAGGTGATC
CGGATTATCA AACGCGTGCT GAGCAAATCA AATATCGAAT CGTCGCTGCA TACGGTCGCA
AACTGGCGCG AGGCCGAAGA AGCCGCCGCG CAGCTTTCGG CCGACGAAGG GCTGATCGTG
TTCATGGCGA AACGCGGAAT GGTTTCCTAC TTCCCGCAAA TGGGCGGTAT TCCGGATTTT
CTCAACCAGC ATTCGCGCGA CAATAACTTC CTGCTCATAT TCCCGTTCTC GCAGCAGGAC
GATGACCAGA CCGAACGGCG CTCGGTGAGC AACCACGACG ATTTTATCGA AATAGGGAAG
ATTATCGGTA AAATATTCCC GAGCTGA
 
Protein sequence
MQLLNIHIGS LPIEDPVLKF LIELIIILGA PLLLNKIKVP HLLGLLIAGA LVGPNGLNLL 
ARDSSVVVTG TTGLLYIMFL AGLEIDMGDF KKNKWKSIGF TAYTFAIPFV LGLLGGYYVL
RFPILTTVLF ASLFSSHTLI AYPLVSKLGI SKNLSVNITV GGTMLTDVLS LLVLAVVVGM
TQGAVDSAFW IRLIVSVLSF SLVVLFVFPI IGRWFFKRVE DKISQYIFVL VMIYLAAVLA
ELAGIEAIIG AFFAGLALNR LIPHSSSLMN RVEFVGNAIF IPFFLISVGM LIDFKVIVKS
WETVGVAAVM LVASIGGKYL AAIFTQKTFK LTKDEGMLIF GMSSASAAAT LAAVMVGYNI
VISETPAGEP VRLLSEHVLN GSILLILISC TISSFVSMSS GEKIAEADKE NTASGINREN
ESILIAVNYE ETVEKLVNLG LMIKAGHNDD RLLALNVVND DKNESSVKNA EKTLHIAVDT
GAAADVAIQQ VTRYDQDVSS GISNVIKEQR ITDLLIGLQP EKGFTPSFIY NLYNGYLQND
NVNTLIYHAA QPISTVKRYV VLIPARAERE PGFFHALLRV WNIAKNSSAE MSFYGGEQVI
RIIKRVLSKS NIESSLHTVA NWREAEEAAA QLSADEGLIV FMAKRGMVSY FPQMGGIPDF
LNQHSRDNNF LLIFPFSQQD DDQTERRSVS NHDDFIEIGK IIGKIFPS