Gene Dfer_2189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2189 
Symbol 
ID8225761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2679293 
End bp2680108 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content55% 
IMG OID644930026 
ProductNUDIX hydrolase 
Protein accessionYP_003086577 
Protein GI255035956 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGT GCATATTTGT GCCTGAAAGC CGTATCTGCG ATATTGCCGC GCCAAACACG 
CCTAAACACC ACATGAGGGA CATGCATTCA CCCAGCGAAC AGGACTACAT TCAGCAGCTT
TCCATTGACT GCGTCATTCT GGGTTACCAG GATTCGCAAC TCAGCGTGCT GGTGCCGAAG
CTGAATTTCC GCGGCGATTT CTGGGCTTTG CCGAGCGGGT TTATCAACCA GGACGAGGGG
ATCGATCAGG CTGCGCGGCG AATCCTGGAA GACCGAACGG GCATCAAGGA CATTTACCTC
GAACAATTCC GCGTGTTCGG CGATGCGCCC CGTTCCAACA TCCGCTTCCT CGAACGACTG
ATCGAACTCA ATGGCGATAC GCTCGGCGAC AAGCGCTTTA ACCGCAAGGA ATTCGACTGG
ATCACGCGGC GCTTCGTTTC GATCGGCTAC TACGCGCTGG TGGATATCAG CAAGGTAGTC
CCGCGCAAGA CCGAGCTCGA CGAATCCATC GACTGGTACC CGGTGCGCGC ATTGCCGCCG
ATGATCATGG ACCACCACGA CATGGTGAAA TGTGCATTGG AAACCGTGCA GCTCAACCTC
GACCAGAAGC TCATCGCATT CAACCTTTTG CCCGAAACAT TTACAATGCG CGAGCTGCAA
GAGCTCTACG AGTCGATTTA TGACCGTGCA TTTGCGCGGA ACAATTTTCA GAAAAAGATC
CTGGACCTGG ATGTGCTCGA AAGGCTCGAA AAGAAATTCA CCGGCGCGGC CAACAAGGCG
CCGTACCTGT ACCGGTTCAG AAGAAGGGAC GCCTAG
 
Protein sequence
MLLCIFVPES RICDIAAPNT PKHHMRDMHS PSEQDYIQQL SIDCVILGYQ DSQLSVLVPK 
LNFRGDFWAL PSGFINQDEG IDQAARRILE DRTGIKDIYL EQFRVFGDAP RSNIRFLERL
IELNGDTLGD KRFNRKEFDW ITRRFVSIGY YALVDISKVV PRKTELDESI DWYPVRALPP
MIMDHHDMVK CALETVQLNL DQKLIAFNLL PETFTMRELQ ELYESIYDRA FARNNFQKKI
LDLDVLERLE KKFTGAANKA PYLYRFRRRD A