| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2173 |
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| Symbol | |
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| ID | 8225745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2656197 |
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| End bp | 2657378 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644930010 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003086561 |
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| Protein GI | 255035940 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA ACCAAGTAAA AACAGTTAAA GGGCTAGCCG CACTTCTGTT ACTAACCGCC
GGTTCCGCAC TGATATACAG CTGCGGTTCC TCCACCGCCA ATGCCCCCGA GTCGGCACCG
CCGGCACAGG CCCTGCCGGT TATCACTGTT AGCGATCACG AGGTCACCTC GCACCGCGAA
TTTACGGCGT CCATCCAGGG CAGCCGCGAC ATCGAGATCC GCCCGCAGGT GGATGGCTAC
CTCGACCGCA TTTCGGTAGA CGAGGGCGCC TATGTACACA AGGGCCAGGT GCTGTTCCAT
ATCGACGCCC GTCCTTACAC CGAGCAGCTC AATACCGCCA AAGCCAGCCT CCAATCGGCC
AAAGCCGCTT TGGAAAGTGC TTCGATCAAT GTCGACAAAC TGACCCCGCT CGTCGCCAAC
AAGGTGGTTT CCGATGTTCA GGTGAAAAGC GCGAAAGCGG CCTATGACGC CGCCAAAGCG
AATGTAGCCC AGGCGCAAGC GGCTGTCGAC GCGGCGAAGA TCAACCTCGG TTACACGTCC
ATCACCGCGC CGGCCGACGG CTATATCGGA ACGATCCCGT ATAAGACCGG CAGCCTCGTT
GGAAAAGGCA CGATGGAGGC CTTGACGGTC CTTTCGGAGA CAAAAGATAT CTACGTTTAC
TTTTCGATGA GCGAGCTCGA CTTCCTCGAT TTCAAGCAGG AATTTGAAGG AAATACGATC
GAACAGAAGA TCAAGCATAT CCCGCCGGTT GAACTCGTGC TGGCCGACAA CAGCATTTAT
CCCCAAAAAG GAAAAGTACA AGTCGTTGAA GGCCAATTTG ATAAAACAAT GGGAGCCATC
AACTTCCGTG CGACTTTCCC GAACGGGAAC GGGCTGCTGC GCTCGGGAAA CACGGGCAGG
GTCCGCATTC CGCGCCAGCT CGCGAAATCG GTGCTGATCC CGCAGGAAGC GACGTTCGAA
TTGCAGGACA AGGTGTTCGT ATACACCGTA CTTGACAGCA ACAAGGTGGA AGGCCGCCCG
GTGACGGTGG CGGACCGCAG CGGACGTTAC TACCTCATTT CCAAAGGTTT AAAACCGGGT
GAAAAGATCG TGTACGCCGG GCTCGACAGG CTGCGCGACG GTATGGCCAT TGCACCGCAA
AAAATGTCGA TGGACAGCCT GTTGCACGCA AATCCGATCT AA
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| Protein sequence | MKKNQVKTVK GLAALLLLTA GSALIYSCGS STANAPESAP PAQALPVITV SDHEVTSHRE
FTASIQGSRD IEIRPQVDGY LDRISVDEGA YVHKGQVLFH IDARPYTEQL NTAKASLQSA
KAALESASIN VDKLTPLVAN KVVSDVQVKS AKAAYDAAKA NVAQAQAAVD AAKINLGYTS
ITAPADGYIG TIPYKTGSLV GKGTMEALTV LSETKDIYVY FSMSELDFLD FKQEFEGNTI
EQKIKHIPPV ELVLADNSIY PQKGKVQVVE GQFDKTMGAI NFRATFPNGN GLLRSGNTGR
VRIPRQLAKS VLIPQEATFE LQDKVFVYTV LDSNKVEGRP VTVADRSGRY YLISKGLKPG
EKIVYAGLDR LRDGMAIAPQ KMSMDSLLHA NPI
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