Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2158 |
Symbol | |
ID | 8225730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 2640397 |
End bp | 2641641 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644929995 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_003086546 |
Protein GI | 255035925 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000731035 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTACAAC AGGACGACTT TTTATTTGCC GACATTGAAC GGGTAAATCA AATACCCATT GTCAAAACCA TGTTGGAAGT AATTTGTCGA TCCACCGGCA TGGGCTTCGC GGCGGTGGCA CGGGTAACGG AAGACCGCTG GATCGCATGC AGCGTGCAGG ACGAAATCGG ATTTGGCCTC ACACCGGGCG ACGAACTGGA AATCGGTACG ACGATCTGCA ATGAGATCCG CGCCAGCGGC GAGGCCGTGG TGATCGACCA TGTGGATGAA AGCGAATCTT ACTGCGGCCA TCCCACCCCG CGGATGTACG GTTTCAAAAG CTACATCTCC CTCCCAATAA GGCTCAAAAG CGGTGAATTT TTCGGCACAC TCTGCGCGAT AGACCCCAAG CCCAACCAGC TTCAAAACCC GCGCGTGATG GGCATGTTCC ACCTTTTTGC GGAGCTGCTC GCATTCCATC TCGACAACAT CCGGCTCATG GAACGCACGC ACACCGCCAT GCAGGACCTG GCCGCTCAAC TGGTTGCTTC CAATGATGAA AACCGGCAGT ACCGTCATAT TTCGAGCCAT AATTTGCAGG AACCGCTCCG TAAGCTACGG GTTTTCAGCG ATATGCTCGT TAACGCCACC GATCGCAACG AGGCTGAAAA AGCGAAGGAG TTCGCGGTGA AAATCCGCAC GAGCGCACAG CAGTTTTCCA TGATGATCAA AGACTTGTCC GATTTTTCCG GATTGACCAG CAAGAGCAGT TTTGCCGACG TCCGCCTGGA TCGTGTAGTC GCCGACGTTA TGGCCCAGCT CAGCCCGCAG ATCGAACACC GTAGCATTGA AATAGAAACC CTTCGCCTGC CCACGGTGAT GGCTGTTCCC GAGCAAATGG AGCAGCTTTT TTACCAGTTG CTGCACAATG CGGTCAAATT TGCGGGGCAC GACGAGCCGC CGCGCATCCG CATTTCGAGC CGGGAAATGG CGCTGCACGA AATCGAAGAC CTGCTGCGCG AGCCGCTACA AATGGCTTAT GCCGAGATCC GGGTGGAGGA CAATGGCGTC GGAATCGAAG ATTCACAGCT CGAAAAGGTG TTCGATATAT TCGCAAGGCT TCCCACGGGG GCATTCGGGC AGGGCGAAGG CGTAGGCCTG GCCTATTGCC GCAAGATCGT CCGCAATCAC AAGGGCATTA TCAAAGCCGA GGCGAACCCG GGGAAAGGCA CGACATTTGT GATTACGCTC CCATTGTTCA ACTGA
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Protein sequence | MVQQDDFLFA DIERVNQIPI VKTMLEVICR STGMGFAAVA RVTEDRWIAC SVQDEIGFGL TPGDELEIGT TICNEIRASG EAVVIDHVDE SESYCGHPTP RMYGFKSYIS LPIRLKSGEF FGTLCAIDPK PNQLQNPRVM GMFHLFAELL AFHLDNIRLM ERTHTAMQDL AAQLVASNDE NRQYRHISSH NLQEPLRKLR VFSDMLVNAT DRNEAEKAKE FAVKIRTSAQ QFSMMIKDLS DFSGLTSKSS FADVRLDRVV ADVMAQLSPQ IEHRSIEIET LRLPTVMAVP EQMEQLFYQL LHNAVKFAGH DEPPRIRISS REMALHEIED LLREPLQMAY AEIRVEDNGV GIEDSQLEKV FDIFARLPTG AFGQGEGVGL AYCRKIVRNH KGIIKAEANP GKGTTFVITL PLFN
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