| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2153 |
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| Symbol | |
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| ID | 8225725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2632227 |
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| End bp | 2635355 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929990 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086541 |
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| Protein GI | 255035920 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000607651 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.711508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAC CACTTCTACT CATCTTCACC CTGCTGCTGG CGGCTTTGGC TGCTCATGCG
CAGAACCGCG TACTGAAAGG GGTTGTGATC GATGGCGTCT CGAAGGAACC GATGCCTGGC
GTTTCGATCC TGGTTTCGGG TACCAACTCG GGAACGGCCA CTGATGTCGA GGGAAAGTTT
ACGTTGAATG TGCCGGAAAG CGGCGCGAAG GTGATTATCA GCTATGTAGG TTTTGTGAAA
CAGGAGATCG AAGTGGCTAA CCGCGGCTCG CTCACGGTGG TGCTCGAACC GGACGTGAAG
GCGCTCGAAG ATGTGGTGGT GGTAGGTTAC GGCGAGCAAA AGCGCTCGCA CCTCACCGGC
GCCGTGGCGA CCGTTAAAAT GAAGGAACTC GACGAATTGC CCGTGGGCGA CATCTCGTCC
GCATTGGTGG GCAAGCTGCC GGGTGTAAAT GTCAGCGGCG GTACCGCCCG CCCCGGAGCA
CCGGCGTCGA TCACGATCCG TAACCCGACG AAGGCTTCCA AAGACGGCGG CAGCAACTCA
CCGCTTTATA TTATAGACGA CGTGATCCGC TCCGAGGCTG ATTTTCAGTT GCTCGATGCT
TCCGAAATCG AAAACCTTTC CATCCTGAAA GACGGTGCAG CCGCAGTTTA CGGCGCTCGG
GCGGCATTGG GCGTGGTGGT AGTGCGTACC AAACGCGGGA AAGCGGGTAA GCCTACCGTC
AACTACACCA CCACCGTAGG TGTGTCCGAC GCCTCGTACC GCTCCAAAAT GATGGACGGC
GTGCAGCTCG CCACGTATCT GAACGATTTC AACCGCAGCC GCGGTCTCGC CCCGAACGAT
CCCGAATATT ACTCGGCGGA TGAACTGGAG CATTTCAGAA AAAACAACTA TAACTGGTTC
GATATGGCCT GGAAACCTTC GCTCAATACC CGCCACGCGG TGAACATCAG CGGCGGTACC
GAGCGGGCCA CATTCTTTGC CGGCGCTACC TATTTTTATC AGAACGGGAA TGTCGATAAC
ATCAGCTACA AAAAATGGAA CTTCCGCGCC AGCACGGACG TGAATGTGAC CAAGCATATT
AAGGTAGGTC TAGGCGTGAG CGGTAACCTG TCCGACAACA AGCTGTTTTA CCTCAAACAA
GGCGGCGAGA ACGTGGAGAA GGACGTCACC AACCTTTTGA ACACACCCCA GTTCATCCCG
CCTTATGTGG ACGGCCTGCC GGTTCTGCTG CCGGGCGGCT CGGGAACTAC CGGCTTCCAT
TTCTTCGAAG CGCAAAAGCT CAACAACTAC ACCCGCGCCC GCAATGTGGT GCTGAATGTG
AATGCATACC TGGAATACAA TGTGCCATTT GTACCCGGCC TCAAACTCCG CACCGTGTAC
AACAAGAACC TCGGCAACGA CTGGGGCAAG CAGTTTGGTA CTTATTACAA AACCTACGGT
TTCTCGATGC TGGGCGACAA CCGGCACATT TATGGCGGCA CGCCCAATGC GCCCACACGC
CTCAACAACG GCGACCGCTT GCGCTTCAAT CCTGGGTATA CCGACGGCTA CCAGCTGAAC
TTTAACCTCA GCTACGCCCG CGATTTTGGC CGCCATTCGG TGAGTGCGCT GGCACTTGTG
GAGCAGTCGG AGATTTATAC GGAGAGCATT GCCACCATGA AAGAGGGCAT TTTCGAAGGG
GGGAACGACT ATCTGATGTC GGCATTCGGT GCGAAGGACA TTGGTCCGAA TGCGGCCAAC
GAGAGCGGTA TCCTTTCTTA TGTGGGACGT TTGAACTACT CTTTTGCCGA CCGCTACCTG
TTTGAAGTAT CATTCCGCCG CGATGCATCC ACGAAATTTG CGCCGGAATA TCGCTGGGGT
ACATTCCCGC AGCTTTCTGC TGGCTGGGTC ATGTCCGAAG AGCGCTTTTT CCGTGAAAAA
TTACCCTTCA TCAACAACCT GAAACTGCGT GCGTCCATCG GTTTCCTCGG CGGCGATCGC
ACGGCGGCCT GGCAATGGAT GCAGCGCTAC ACGCCGCAAG CTTCGAACGG CGCTGTGTTT
GGCGGCAACA GCGACCGCAC GGTGGGTATC AAGCTCGAAA AACTGCCTAA CTACTATGGC
CGCTGGGACG ATGTTACCAA GAAAAACTTC GGTATCGACG CGGCATTCCT CAACAACCGC
CTTACGACGA CTATCGATGC GTACCACGAT CATGGCTACA ACTTGCTGAC GACCATGGCA
TCGTCCGTGC CGCTGACGAT CGGTTCGGTG ATGCCGGCAG AGAATTTCGA GACGGTAAAC
TCGTTCGGTC TGGAATTCGC GACCGGGTGG AGCGACCGCA TTGGAAAAAA CATCGACTAT
AACATCGGCG CATTCCTCGC TTGGAGCGAC AATAAGAATG TTCTTGTGGA CGTGGCCGCT
ACCAACCGCG GCACCTGGCT CGATCCTACG GGCCGGTCGA GCGACCGCGG CGTGCAGGGC
TACCGCTACC TGGGCATGTT CCGCACGCAG GAAGAGGTGG ACCGCTTCCT CGAAACCAAC
CCCGACTACA CGATCATGGG GTACGCACCG AAACCGGGCA TGCTCTATTA CCAGGATATC
CGCGGCCCAC GCCAGACCGA CGGCAGCTAT GCAGCCCCGG ATGGCAAAAT TACCGAGGAC
GACCAGGAGT TTCTAACAAA CAAGCAGAAT AACCATTACA CATTTGGTCT GTCGTTCGGA
TTAGGGTTTA AAGGTTTCAG AGTGGATGTG GTGACGGCCG GATCGTTCGG CGGGCAGGGA
CTTGTGGATG GTGATGCGCG CAAAAAAGCA GGGAAGGATA TTTCCCGCCC CGTTTTCTGG
GCCGATCACT ATACGCCCGA AAACCCGAAT GCCAAATATC CCGATCCTTT CTATGAAGAA
ACGTACTCGA TCAACTCGGC ATTCTGGTTC CGCAGCGCAT TCGCATTCAA CATGCGTAGC
CTGAACTTGT CGTACCAACT GAACCAGAAC GTAGCAAAAA AGCTGGGGAT CAGCTCTGCC
CGGATCATCG GCGTGGGTAT GAACCCGATC ACATTCTTCA ATCCTTACGA CTATAAGGCA
GCTTCGGGCG ATTACAATGT GTACCCGCAA ATGCGCACCT GGTCATTGGG ATTAAACCTT
ACACTCTAA
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| Protein sequence | MRKPLLLIFT LLLAALAAHA QNRVLKGVVI DGVSKEPMPG VSILVSGTNS GTATDVEGKF
TLNVPESGAK VIISYVGFVK QEIEVANRGS LTVVLEPDVK ALEDVVVVGY GEQKRSHLTG
AVATVKMKEL DELPVGDISS ALVGKLPGVN VSGGTARPGA PASITIRNPT KASKDGGSNS
PLYIIDDVIR SEADFQLLDA SEIENLSILK DGAAAVYGAR AALGVVVVRT KRGKAGKPTV
NYTTTVGVSD ASYRSKMMDG VQLATYLNDF NRSRGLAPND PEYYSADELE HFRKNNYNWF
DMAWKPSLNT RHAVNISGGT ERATFFAGAT YFYQNGNVDN ISYKKWNFRA STDVNVTKHI
KVGLGVSGNL SDNKLFYLKQ GGENVEKDVT NLLNTPQFIP PYVDGLPVLL PGGSGTTGFH
FFEAQKLNNY TRARNVVLNV NAYLEYNVPF VPGLKLRTVY NKNLGNDWGK QFGTYYKTYG
FSMLGDNRHI YGGTPNAPTR LNNGDRLRFN PGYTDGYQLN FNLSYARDFG RHSVSALALV
EQSEIYTESI ATMKEGIFEG GNDYLMSAFG AKDIGPNAAN ESGILSYVGR LNYSFADRYL
FEVSFRRDAS TKFAPEYRWG TFPQLSAGWV MSEERFFREK LPFINNLKLR ASIGFLGGDR
TAAWQWMQRY TPQASNGAVF GGNSDRTVGI KLEKLPNYYG RWDDVTKKNF GIDAAFLNNR
LTTTIDAYHD HGYNLLTTMA SSVPLTIGSV MPAENFETVN SFGLEFATGW SDRIGKNIDY
NIGAFLAWSD NKNVLVDVAA TNRGTWLDPT GRSSDRGVQG YRYLGMFRTQ EEVDRFLETN
PDYTIMGYAP KPGMLYYQDI RGPRQTDGSY AAPDGKITED DQEFLTNKQN NHYTFGLSFG
LGFKGFRVDV VTAGSFGGQG LVDGDARKKA GKDISRPVFW ADHYTPENPN AKYPDPFYEE
TYSINSAFWF RSAFAFNMRS LNLSYQLNQN VAKKLGISSA RIIGVGMNPI TFFNPYDYKA
ASGDYNVYPQ MRTWSLGLNL TL
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