Gene Dfer_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2149 
Symbol 
ID8225721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2624022 
End bp2625572 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content54% 
IMG OID644929986 
Producthypothetical protein 
Protein accessionYP_003086537 
Protein GI255035916 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3408] Glycogen debranching enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.243625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.515459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTATT TAAAAATTGG TTTTGCAATA ATTTGCGCCG GATTACTCGG CTTAACCGGT 
TGTTCACGAA AAGCGGCCGG ACCGGCGGTG CTGAAAGCGG AGGATTACAA GCACCATGTG
ACGTATTTCA ACCGGATGGA GGATGAAAAC AAGGTAAATG CGATCCCTAA CGCGCAGTCG
TGGGAATGGA TGAAAGCCAA TGTGCCGCTG TTCGACTGTC CGCAGGATAA TTTCCGCGAA
ATATATTACT ACCGCTGGTG GACCTACCGG AAGCACATTC ACAACACGCC GCAGGGCTTT
GTGATCACCG AATTTATTGT CAACAGGAAT TATGCAGATA AATATAATAT GATCAGTTGC
GCCCTCGGCC ATCACATTTA CGAAGGCCGT TGGCTGCACG ATCAGCGTTA TCTGAACGAC
AATGTGCACG TGTGGTTCCG CGGGAACGAA GGCGGGCGCA TGAAAAAGCT GCTCAATTTC
AGCAGCTGGA CCGCCGACGC ATTATACAAC CGCTACAAAG TGACCCAGGA TAAGGCGTAC
CTGCTCGATA TGCTGCCTGA TTTGGATTCG GAATACAAGG CGTGGGAGAA AGACCGGCGC
ACGGAAAGCG GCCTTTTCTG GCAAACCGAC GTAAAGGACG GCATGGAAGA GTCGCTGAGC
GGCGGCCGGC GGGAGCAGAA TGCGCGTCCG ACGATCAACA GTTATATGTA CGGCAACGCG
AAGGCGCTGT CGGCGATGGC CGCATTGAAA GGTGACGATG GAATGTCGAA GCTGTACGCG
GCCAAGGCGG ATACCTTGAA AAGGCTCATT GATAGTAAGT TATGGAATGC GGATAGCAGT
TTCTTCGAAA CAGTAAAGAA GCGGGGCAAA GGCCCTTTTG CGGGTGTGAA AGAGGCGACC
GGGTTTATTC CGTGGTATTT CGATATCCCC GATGAAAAAT ATGATGGAGC CTGGAAGCAA
GTGGCTGATC CAACGGGTTT TAATGCGCCA TTCGGGCTAA CAACCGCCGA GCGACGCCAC
CCCGGGTTCC GCACGCACGG CTGCTGCCAA TGCGAATGGG ACGGGGCGGT GTGGCCATTT
GCAACGGCGC AAACGCTGAC CGGCCTCGCC AACCGCCTCA ATGCGCCAAA GCCGGAAGTA
GTTGCGGACA CGACGTATTT TGGCCTGCTG GAAAAATACG TGGAGTCGCA GTATTACCGA
GGGAAGCCCT ACATCGGCGA ATACCTGGAC GAAAAAACCG GTTACTGGCT CAAAGGCGAC
CAGGAGCGGA GCCGGTACTA CAACCACTCG ACGTTCAACG ACCTGATTAT CACCGGACTT
GTGGGGCTGC GCCCGCGTGC GGACGAGGTG ATCGAGGTAA ACCCGCTCAT ACCGCAGGAT
AAATGGGACT GGTTTTGCCT CGACGACGTG CTTTACCACG GCAAGCGCCT CACGATCCTC
TGGGACCGCG ACGGCAGCCA TTACAAAAAA GGCAAAGGCT TGCAGGTATT TGTAAACGGT
AAAAAAGCCG GCTCGTCCGA ACGGATTTCG AAGATTTTAA TCGAGCCTTA G
 
Protein sequence
MGYLKIGFAI ICAGLLGLTG CSRKAAGPAV LKAEDYKHHV TYFNRMEDEN KVNAIPNAQS 
WEWMKANVPL FDCPQDNFRE IYYYRWWTYR KHIHNTPQGF VITEFIVNRN YADKYNMISC
ALGHHIYEGR WLHDQRYLND NVHVWFRGNE GGRMKKLLNF SSWTADALYN RYKVTQDKAY
LLDMLPDLDS EYKAWEKDRR TESGLFWQTD VKDGMEESLS GGRREQNARP TINSYMYGNA
KALSAMAALK GDDGMSKLYA AKADTLKRLI DSKLWNADSS FFETVKKRGK GPFAGVKEAT
GFIPWYFDIP DEKYDGAWKQ VADPTGFNAP FGLTTAERRH PGFRTHGCCQ CEWDGAVWPF
ATAQTLTGLA NRLNAPKPEV VADTTYFGLL EKYVESQYYR GKPYIGEYLD EKTGYWLKGD
QERSRYYNHS TFNDLIITGL VGLRPRADEV IEVNPLIPQD KWDWFCLDDV LYHGKRLTIL
WDRDGSHYKK GKGLQVFVNG KKAGSSERIS KILIEP