Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2149 |
Symbol | |
ID | 8225721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2624022 |
End bp | 2625572 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644929986 |
Product | hypothetical protein |
Protein accession | YP_003086537 |
Protein GI | 255035916 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3408] Glycogen debranching enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.243625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.515459 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTATT TAAAAATTGG TTTTGCAATA ATTTGCGCCG GATTACTCGG CTTAACCGGT TGTTCACGAA AAGCGGCCGG ACCGGCGGTG CTGAAAGCGG AGGATTACAA GCACCATGTG ACGTATTTCA ACCGGATGGA GGATGAAAAC AAGGTAAATG CGATCCCTAA CGCGCAGTCG TGGGAATGGA TGAAAGCCAA TGTGCCGCTG TTCGACTGTC CGCAGGATAA TTTCCGCGAA ATATATTACT ACCGCTGGTG GACCTACCGG AAGCACATTC ACAACACGCC GCAGGGCTTT GTGATCACCG AATTTATTGT CAACAGGAAT TATGCAGATA AATATAATAT GATCAGTTGC GCCCTCGGCC ATCACATTTA CGAAGGCCGT TGGCTGCACG ATCAGCGTTA TCTGAACGAC AATGTGCACG TGTGGTTCCG CGGGAACGAA GGCGGGCGCA TGAAAAAGCT GCTCAATTTC AGCAGCTGGA CCGCCGACGC ATTATACAAC CGCTACAAAG TGACCCAGGA TAAGGCGTAC CTGCTCGATA TGCTGCCTGA TTTGGATTCG GAATACAAGG CGTGGGAGAA AGACCGGCGC ACGGAAAGCG GCCTTTTCTG GCAAACCGAC GTAAAGGACG GCATGGAAGA GTCGCTGAGC GGCGGCCGGC GGGAGCAGAA TGCGCGTCCG ACGATCAACA GTTATATGTA CGGCAACGCG AAGGCGCTGT CGGCGATGGC CGCATTGAAA GGTGACGATG GAATGTCGAA GCTGTACGCG GCCAAGGCGG ATACCTTGAA AAGGCTCATT GATAGTAAGT TATGGAATGC GGATAGCAGT TTCTTCGAAA CAGTAAAGAA GCGGGGCAAA GGCCCTTTTG CGGGTGTGAA AGAGGCGACC GGGTTTATTC CGTGGTATTT CGATATCCCC GATGAAAAAT ATGATGGAGC CTGGAAGCAA GTGGCTGATC CAACGGGTTT TAATGCGCCA TTCGGGCTAA CAACCGCCGA GCGACGCCAC CCCGGGTTCC GCACGCACGG CTGCTGCCAA TGCGAATGGG ACGGGGCGGT GTGGCCATTT GCAACGGCGC AAACGCTGAC CGGCCTCGCC AACCGCCTCA ATGCGCCAAA GCCGGAAGTA GTTGCGGACA CGACGTATTT TGGCCTGCTG GAAAAATACG TGGAGTCGCA GTATTACCGA GGGAAGCCCT ACATCGGCGA ATACCTGGAC GAAAAAACCG GTTACTGGCT CAAAGGCGAC CAGGAGCGGA GCCGGTACTA CAACCACTCG ACGTTCAACG ACCTGATTAT CACCGGACTT GTGGGGCTGC GCCCGCGTGC GGACGAGGTG ATCGAGGTAA ACCCGCTCAT ACCGCAGGAT AAATGGGACT GGTTTTGCCT CGACGACGTG CTTTACCACG GCAAGCGCCT CACGATCCTC TGGGACCGCG ACGGCAGCCA TTACAAAAAA GGCAAAGGCT TGCAGGTATT TGTAAACGGT AAAAAAGCCG GCTCGTCCGA ACGGATTTCG AAGATTTTAA TCGAGCCTTA G
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Protein sequence | MGYLKIGFAI ICAGLLGLTG CSRKAAGPAV LKAEDYKHHV TYFNRMEDEN KVNAIPNAQS WEWMKANVPL FDCPQDNFRE IYYYRWWTYR KHIHNTPQGF VITEFIVNRN YADKYNMISC ALGHHIYEGR WLHDQRYLND NVHVWFRGNE GGRMKKLLNF SSWTADALYN RYKVTQDKAY LLDMLPDLDS EYKAWEKDRR TESGLFWQTD VKDGMEESLS GGRREQNARP TINSYMYGNA KALSAMAALK GDDGMSKLYA AKADTLKRLI DSKLWNADSS FFETVKKRGK GPFAGVKEAT GFIPWYFDIP DEKYDGAWKQ VADPTGFNAP FGLTTAERRH PGFRTHGCCQ CEWDGAVWPF ATAQTLTGLA NRLNAPKPEV VADTTYFGLL EKYVESQYYR GKPYIGEYLD EKTGYWLKGD QERSRYYNHS TFNDLIITGL VGLRPRADEV IEVNPLIPQD KWDWFCLDDV LYHGKRLTIL WDRDGSHYKK GKGLQVFVNG KKAGSSERIS KILIEP
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