Gene Dfer_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2148 
Symbol 
ID8225720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2622858 
End bp2623943 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content54% 
IMG OID644929985 
ProductBNR repeat-containing glycosyl hydrolase 
Protein accessionYP_003086536 
Protein GI255035915 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4692] Predicted neuraminidase (sialidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.595047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.679111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAAA CTTTAATAAA ATGGCTTTTC TGCGGCGCGG CGCTGTTCAC ATTGCCCGTA 
CATGCACAGA CTTTCAAGGA GGGCATTCTC GTCGACGAGA ACATTTTTGA AACGGCCCCA
TTCCCCGAAA GCCACGCGTC GACCATCGCA GAAACGCCCG CAGGGCTCGT TGCGGCGTGG
TTTGGCGGCA CGAAAGAGCG TAATCCGGAC GTAGGCATTT GGGTGAGCCG TTTGGAAAAT
GATAAATGGA CGGCGCCCGT GGAGGTAGCG AATGGCGTAG TGAACGAAAA GCTCCGCTAC
GCGTGCTGGA ACCCGGTTTT GTACCAGATT CCGAAGGGAG AACTCATGCT TTTTTACAAG
GTAGGGCCCA ATGTGGCCGG CTGGAAGGGC TTTTTGATCA CTTCCAAAGA CAATGGTAAA
ACGTGGTCGA AGCCAACGGC GTTGCAGGAA GGCTATTTGG GACCGGTGAA AAATAAGCCG
GTGCTGTTAG CGAACGGCGA GCTTTGGTGC CCGTCGAGCA CCGAGGGGGA AGGCGGCTGG
CGCTTGCATT TCGAGGTAAC ACCGGATTTT GGCAAAACCT GGCGGAAGGT AGGCCCGCTG
AACGATGGAA AGACGATCAA GGCCATTCAG CCAAGTTTGC TGACCTACGC TAACGGAGAT
ATGCAGATCC TATGCCGGAG CCAGAGCCGT TCGATCGTCG AATCGTGGTC GAAAGACGGT
GGGAAAACAT GGTCGGAAGT GGGACCTTCT GCATTGCCGA ATAATAACTC GGGCACCGAT
GCCGTGACAT TGAAAGATGG CCGGCAACTA CTGGTGTACA ATCACGTAAA GCCGCCGGCA
GGTCAGCCGA AAGGACCGCG TACGCCTTTG AATGTGGCGG TTTCCAAAGA CGGGAAGAAC
TGGGAAGCCG TGCTGATTTT GGAGGATTCA CCGATCAGTC AGTATTCGTA TCCGTCTGTG
ATTCAGTCTA CTGACGGTAT GGTGCACATT GTGTACACGT GGCGCCGCCA GCGGATCAAG
CACGTGAAAA TCGACCCGTC GAAGCTGAAA GGCAAGGCGA TCGTGGAAGA ACAGTGGCCT
ATTTGA
 
Protein sequence
MRKTLIKWLF CGAALFTLPV HAQTFKEGIL VDENIFETAP FPESHASTIA ETPAGLVAAW 
FGGTKERNPD VGIWVSRLEN DKWTAPVEVA NGVVNEKLRY ACWNPVLYQI PKGELMLFYK
VGPNVAGWKG FLITSKDNGK TWSKPTALQE GYLGPVKNKP VLLANGELWC PSSTEGEGGW
RLHFEVTPDF GKTWRKVGPL NDGKTIKAIQ PSLLTYANGD MQILCRSQSR SIVESWSKDG
GKTWSEVGPS ALPNNNSGTD AVTLKDGRQL LVYNHVKPPA GQPKGPRTPL NVAVSKDGKN
WEAVLILEDS PISQYSYPSV IQSTDGMVHI VYTWRRQRIK HVKIDPSKLK GKAIVEEQWP
I