Gene Dfer_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2143 
Symbol 
ID8225715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2617277 
End bp2618788 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content53% 
IMG OID644929980 
Productcarbohydrate kinase FGGY 
Protein accessionYP_003086531 
Protein GI255035910 
COG category[C] Energy production and conversion 
COG ID[COG0554] Glycerol kinase 
TIGRFAM ID[TIGR01311] glycerol kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0628081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.75398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAACG GCCCATTTGT GCTGGCGATC GATCAGGGTA CGAGTAGTAC CAAAACCGTC 
ATTTTTAATG ATAAGGGAAA GGTTGTGGCG CGCGGCAGCG AGCCGCTGCA CACCATGTAC
CTCGATGGCG GGCTGGTAGA GCAGGACCCG CAAGAGATTT ATGAGAATGT ATTGAAGTCG
GTTGCCAAAT GCGTGGCGGA TTTCACGTCC AAAGAAGGAC GTATAGAGGA TATCCGTTCG
TGCGGTATTT CAAATCAGCG GGAAACTTTT GTGCTTTGGG ATAACAAGGG CGCGCCGCTG
CACAATGCGG TGGTTTGGCA ATGTAAACGG TCGACGGCCG TCTGCGAGCA GTTGCGTGCG
GAGGGTCTGG AAGAAATGAT CCGGCAGAAA ACGGGCCTTC TGGCCGACCC TTATTTTTCA
GGGTCCAAGG TGATATGGCT GAACCTTCAT AATGAACGCG TGAAAACGGC GGTTGCGGGG
GGAAATGCGT TTTTTGGGAC CGTCGATACA TGGCTGCTGC ATAAACTCAC CAATGGGAAA
GCATATCTCA CGGATCATAC CAACGCGTCG CGGACGCTGT TTTTTAACCT GGAAACGCTT
TCGTGGGACG CGGAATTGAT CAGTGTATTT GGGCTGGAAG GATTGCATTT GCCTGATATT
CAGTCGTCAT CGTCGCATTT TGGTGAAACG GATTTTAACG GTCTGTTTCC AGAGGCAATA
CCTATCACCG CGATGATCGG CGACTCGCAT GCCGCCGCTT TTGGCGAGGG GTGCTTTGGG
CCGGGAATTG CCAAGGCGAC CTTGGGCACC GGTTCGTCCA TTCTGATGAA CATCGGTCCT
GAGCCGAAGC CATCGCAGCA GGGAATGGTC ACAACGATCG GTTGGAGTGC AGGCGAAAGG
GTAGAATACG CGCTGGAAGG CGTGATCGTA ACGTGCGGAG CGACAATCGA ATGGCTCAAA
ACCCATCTCG AACTGTTCAG CGACATTCGG GAGACGGAGG CAATGGCGCG ATCGGTGAAA
GACAGCGGCG GGGTGTACCT GGTGCCGGCG TTTAGCGGAC TTGGCGCGCC GCACTGGGAT
ATGAACCGCA AGGCGTCCAT TACCGGTCTG ACATTCAATT CAAACAAGAA TCATATTGTG
CGCGCTGCCC TCGAATCCAT CCCTTTCCAG ATCAAGGACG TGATCGTGGC CATGGAGTCG
GATACCGGCA TTGCGTTGCG TGAATTGAAG ATCGACGGAG GGTTGACCTC CAATAATTTC
GTCGTACAGA TGCTGGCCGA TCTGCTTGAA AAGCCGGTCG TGAACCTTGG TTTTCCCGAA
GTTTCCGCTC TCGGTGCGGC TTATCTTTCG GGCTTGTATT CCGGCGTTTA TCCAGGCATT
GAATATTTGC AAAAATTAAG TGAAAACCAT TCTTCGGTAG CACCGAAAGT GAACAACGAG
GCGGTGAAGG CGGCTTACCG CGGCTGGCAG GAAGCGGTGA GTAGTGCGCC TCAAATTTGT
GTAACACATT GA
 
Protein sequence
MLNGPFVLAI DQGTSSTKTV IFNDKGKVVA RGSEPLHTMY LDGGLVEQDP QEIYENVLKS 
VAKCVADFTS KEGRIEDIRS CGISNQRETF VLWDNKGAPL HNAVVWQCKR STAVCEQLRA
EGLEEMIRQK TGLLADPYFS GSKVIWLNLH NERVKTAVAG GNAFFGTVDT WLLHKLTNGK
AYLTDHTNAS RTLFFNLETL SWDAELISVF GLEGLHLPDI QSSSSHFGET DFNGLFPEAI
PITAMIGDSH AAAFGEGCFG PGIAKATLGT GSSILMNIGP EPKPSQQGMV TTIGWSAGER
VEYALEGVIV TCGATIEWLK THLELFSDIR ETEAMARSVK DSGGVYLVPA FSGLGAPHWD
MNRKASITGL TFNSNKNHIV RAALESIPFQ IKDVIVAMES DTGIALRELK IDGGLTSNNF
VVQMLADLLE KPVVNLGFPE VSALGAAYLS GLYSGVYPGI EYLQKLSENH SSVAPKVNNE
AVKAAYRGWQ EAVSSAPQIC VTH