Gene Dfer_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2110 
Symbol 
ID8225682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand+ 
Start bp2575617 
End bp2576219 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content53% 
IMG OID644929947 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003086498 
Protein GI255035877 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0942807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.362877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTG GAACATCAAA AGCAGAGCGC ACCCGAAATT TTATTATTGA AAAAACCGCA 
GAGATTTTCA ACCGGAAGGG CTATGCGGGC ACGTCCATGT CGGACATTAC CGAGGCGACG 
GGGCTTACTA AAGGCAGCAT TTACGGAAAT TTCGAGAATA AGGAAGAAGT AGCGCTGGCA 
GTATTCGAAT ACAACCGTTC GCTGGTTTTC AACACCGTGC AGGCTCAGCT TGAAAAAGCG 
GAGACATATT TTGACAAAAT GATGGTCTAC GGCAGCGTTT ACAAGGACGT CATCGCCAGC 
GTGGGCAACC GCGGCGGATG CCCGATCCTC AACACGGCCG TGGAGGCCGA CGATACCAAT 
GTCCCTTTGC AGCTTAGCGC CGCCAAAGCG CTTTTCAGCT GGAAAAAGAA CCTGGTCGAC 
ATCATCCAGC GAGGGATCGC GGCAGGTGAG TTTCGTGACG GGACCGATGC CGAGGGAATG 
GCCGTGTCCA TCATTGCCCT CATCGAAGGC GGAGTAATGA TTTCGAAGGT CACGAACGAT 
TATGCCAATA TGGACCGCGT GCTGGCCACC GTGCAGCAAC TTGTGAAAGG CATCCGCGCG 
TAA
 
Protein sequence
MNIGTSKAER TRNFIIEKTA EIFNRKGYAG TSMSDITEAT GLTKGSIYGN FENKEEVALA 
VFEYNRSLVF NTVQAQLEKA ETYFDKMMVY GSVYKDVIAS VGNRGGCPIL NTAVEADDTN 
VPLQLSAAKA LFSWKKNLVD IIQRGIAAGE FRDGTDAEGM AVSIIALIEG GVMISKVTND 
YANMDRVLAT VQQLVKGIRA