| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2109 |
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| Symbol | |
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| ID | 8225681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2574336 |
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| End bp | 2575577 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644929946 |
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| Product | fumarylacetoacetase |
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| Protein accession | YP_003086497 |
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| Protein GI | 255035876 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0101993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.602779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACT CCTGGCTGCC GGTTGCCCCG GATTCCGATT TTTCGATTCA TAACCTGCCT
TTCGGGATAT TCAGCGATGA GCGCCCGGCG CGGGCGGGTG TGGCGATCGG CGAATGGGTG
ATTGACCTGT CGGCAGCCTA CGCGCTGAAT ATGTTCCCGC AATATCCCGA AGCCGGGAGT
GCATTCCGAA AGCCGGTGCT GAACGACCTC ATCGCATTAG GCCGGAATTT TTCCGAATAT
GTGCGCCATA CGATCCAATT CGCCCTTTCC GACCCGGATT CCGTGCTCAA CCAGTACGCC
GCAAACCTGC TGATCGCTCA GAAAGGCATT CAAATGCACA TGCCGCTGAA AGTCGGGAAC
TACACCGATT TTTATTCGAG TGAAGAACAT GCCTTGAGCG TCGGTCAGAT TTTCCGGCCT
GATAACCCGC TATTTCCCAA CTGGCGGCAC ATGCCTGTCG CTTACCACGG GCGCGCGTCG
TCGATCGTCG TTTCGGGCAC ACCGGTGCGC CGGCCGGCGG GACAAATTAT CCAGGAAAAT
GGCATACCTG CATTCGCACC GACGAATGCG CTGGATTTCG AGCTGGAACT GGCATTTGTG
ATCGGCAAAG ATTCGGTTAT CGGGCAGCCC CTAGCGGTTG CTGATGCTGA AACGTACATT
TTTGGCGCCA TGCTTTTTAA CGACTGGTCG GCACGAGACA TCCAAAGGTG GGAGTACCAG
CCATTGGGGC CATTCACGAG CAAAAACTTC GCGTCCGGGG TTTCTCCGTG GATTGTGACC
CTGGATGCCC TCGCGCCGTT CCGCACGCCC GCTCCCCCGC AGGAGCCCGC GCCACTCCCC
TACCTTGCCT GCGAACCGCG CGAGAATTTT GACTTGTCGC TGTCCGTGGG CATCAGGTGC
GGCAATGGCG CAGAGCATAC CGTATGCCGG ACAAACGCCC GGCACCTTTA CTGGACGGCC
GCACAGCAAA TTGCCCACCA CACGGTAACC GGCTGCAACC TGCAAACCGG CGATCTCATC
GCCACAGGGA CAATCAGCGG CTGGGAACGT GGCGAGAAAG GTTGCCTGCT CGAAGCCACC
CTGAACGGCA CTGAAGCCGT GCAGCTCGGC GAAAACGTCA CAAGGCGCTT CCTCGAAGAC
GGCGACGAGG TGATTATGCG AGGATTTGGC CAAAACGGCC ATGTGCGGGT TGGGTTCGGG
GAACTGAAAG GCAGGGTGTT GGCAAGCCAA ATGGGACGCT AA
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| Protein sequence | MQNSWLPVAP DSDFSIHNLP FGIFSDERPA RAGVAIGEWV IDLSAAYALN MFPQYPEAGS
AFRKPVLNDL IALGRNFSEY VRHTIQFALS DPDSVLNQYA ANLLIAQKGI QMHMPLKVGN
YTDFYSSEEH ALSVGQIFRP DNPLFPNWRH MPVAYHGRAS SIVVSGTPVR RPAGQIIQEN
GIPAFAPTNA LDFELELAFV IGKDSVIGQP LAVADAETYI FGAMLFNDWS ARDIQRWEYQ
PLGPFTSKNF ASGVSPWIVT LDALAPFRTP APPQEPAPLP YLACEPRENF DLSLSVGIRC
GNGAEHTVCR TNARHLYWTA AQQIAHHTVT GCNLQTGDLI ATGTISGWER GEKGCLLEAT
LNGTEAVQLG ENVTRRFLED GDEVIMRGFG QNGHVRVGFG ELKGRVLASQ MGR
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