Gene Dfer_2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2108 
Symbol 
ID8225680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2573596 
End bp2574330 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content54% 
IMG OID644929945 
Productaromatic amino acid hydroxylase 
Protein accessionYP_003086496 
Protein GI255035875 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3186] Phenylalanine-4-hydroxylase 
TIGRFAM ID[TIGR01267] phenylalanine-4-hydroxylase, monomeric form 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0346551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.391634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGG ATTATGAACG CTACACCGAC GCCGACCACC GGATGTGGCA GCAACTCTTC 
GAACGGCAAA TGCAGCAGCT GCCGCGCATT GCCAGCCAGG CTTACCTGGA CGGTATTGCG
AAAGTAGGCT TTGTACCCGA CCATATCCCG CATTTTGAAC GCGAAACCAA TCCTGCGCTT
CGTGCATTGA CCGGCTGGGA AGTGTACGTG GTGCCGGGAC TGATCCCTCA CCGCGAATTT
TACACGCATT TGTACAACTG CCAGTTCCCC GCATCGAGCT GGCTTCGCAA ACCCGAACAG
ATCGACTACC TGGAAGAGCC CGACATGTTC CACGACACCT TCGGACACGT GCCGCTGCTG
AGTAACGAGG CATTCTGTGC CTTCATGGCG CATTTAAGCG AAGTGGCATT GAAGCATATC
GACCAGGAGG AAATCCTGCA ACGCATTTCG CGGCTCTATT GGTACACCGT CGAATTCGGG
CTGATCCGTG AAAAAGGTGC ACTGAAAATC TACGGCGGAG GCATTATTTC TTCTTCTGGT
GAAAGCCGGT ATTGCCTGTG CGACGATGTT CCCAAGATCG ACTTCGACCT CGCATTGGTG
CTCGACACGC CCTACCATAT CGATCGCTTC CAGGACCATT ATTTCGTGAT CAGCTCCTAC
GAGCAGCTTT ACGAGTCGGT TACCGGCATT GAACCGCTGC TGGAAGCGCA TCTTTCCACC
GGTATTAACC ATTAA
 
Protein sequence
MNQDYERYTD ADHRMWQQLF ERQMQQLPRI ASQAYLDGIA KVGFVPDHIP HFERETNPAL 
RALTGWEVYV VPGLIPHREF YTHLYNCQFP ASSWLRKPEQ IDYLEEPDMF HDTFGHVPLL
SNEAFCAFMA HLSEVALKHI DQEEILQRIS RLYWYTVEFG LIREKGALKI YGGGIISSSG
ESRYCLCDDV PKIDFDLALV LDTPYHIDRF QDHYFVISSY EQLYESVTGI EPLLEAHLST
GINH