| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2106 |
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| Symbol | |
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| ID | 8225678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2571077 |
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| End bp | 2572234 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644929943 |
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| Product | homogentisate 12-dioxygenase |
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| Protein accession | YP_003086494 |
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| Protein GI | 255035873 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0415029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.565208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCT ATCAAAAACT AGGAACCATC CCGCCCAAGC GCCACACGCA GTTCCGAAAA
CCGGACGGCG GGCTTTACTA TGAAGAACTC TTTGGAACGA TCGGTTTCGA AGGCATGTCT
TCCCTCCTCT ATCACACCTG GCGGCCCACG CAGGTGAAAT CGCTTGGCGA GCCCATTGAC
ATTTCCCCGC GCGTGGCTGT GACCAACAAT ATGATGATGC GAAAGCTGAT CGGCTTCGAC
ATGAAACCGG CGGCGGATTA TCTCGACAGC CGAACGCCGT TACTCATGAA CCGCGATCTT
ATTCTCGGCC TGGCCGCCCC CAGCGGTGCT CCGATGGATT ATTTTTACAA AAATGCCGAC
GCCGACGAGC TCCTGTTCGT ACACCGCGGC TCGGGCAGGC TGCGCACGCC GTTCGGGCAG
GTGCCATTCA CATATGGAGA TTATGTACTG ATTCCCAGGG GTACAATTTA CCAGATCGAC
TTCGATGGGC CTGATAACCG CCTGCTTTAC CTCGAATCAC ATTCGCCCAT TTACACGCCC
AAACGCTACC GCAACCATTT CGGTCAGCTC ACCGAGCATT CGCCGTATTG CGAGCGTGAT
TATGTGCTGC CCCGAGACCT CGAAACACAC GACGAGCACG GGGATTTTGT CGTTAAAATC
AAGAAACAGA GCCATTTTCA CCCGGTCACC TACGAAACGC ACCCGTTTGA TGTCATCGGC
TGGGACGGAT ACAATTATCC GTGGGCGTTT TCGATCCATA ATTTCGAACC GATTACCGGC
CGCATTCACC AGCCGCCGCC CGTGCACCAG ACGTTCCAGA CCGACGCATT TGTAGTATGC
TCGTTTTGCC CGCGGCTTTA CGATTACCAC CCGCTGGCCA TTCCTGCACC CTACAACCAC
AGCAATATCG ACTCCGACGA GGTCCTGTAC TACGTCGACG GCGACTTCAT GAGCCGCAAC
GACATCGCGC AGGGGCACAT TACGCTCCAC CCGGGCGGCA TCCCGCACGG TCCGCACCCA
GGCGCCTACG AACGGAGCAT CGGCAAAAAA GAGACCCAAG AACTCGCCGT CATGGTCGAC
ACTTTCCGCC CACTCATGCT CACCGAACAG GCAATGGCGA TTGACGACGG GCGGTACTTT
ATGAGTTGGG GGGAATGA
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| Protein sequence | MPIYQKLGTI PPKRHTQFRK PDGGLYYEEL FGTIGFEGMS SLLYHTWRPT QVKSLGEPID
ISPRVAVTNN MMMRKLIGFD MKPAADYLDS RTPLLMNRDL ILGLAAPSGA PMDYFYKNAD
ADELLFVHRG SGRLRTPFGQ VPFTYGDYVL IPRGTIYQID FDGPDNRLLY LESHSPIYTP
KRYRNHFGQL TEHSPYCERD YVLPRDLETH DEHGDFVVKI KKQSHFHPVT YETHPFDVIG
WDGYNYPWAF SIHNFEPITG RIHQPPPVHQ TFQTDAFVVC SFCPRLYDYH PLAIPAPYNH
SNIDSDEVLY YVDGDFMSRN DIAQGHITLH PGGIPHGPHP GAYERSIGKK ETQELAVMVD
TFRPLMLTEQ AMAIDDGRYF MSWGE
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