Gene Dfer_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2093 
Symbol 
ID8225665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2554039 
End bp2554935 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content54% 
IMG OID644929930 
Producthypothetical protein 
Protein accessionYP_003086481 
Protein GI255035860 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.801588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAA CCACCGGATT ACTGGCGTCC AGCCTGATCA AGCTCAAAAA CCTGCAACTC 
ACCGGCAAGC TGGTGAGCGA GGAGCTGATG CTGGGCATTC ATTCCAGTAA ACGCTCCGGT
ATCGGCATCG AATTTGAACA ATACCGGCAT TACGCCCCCG GCGATGATCC CAAGCGGATC
GACTGGAAAC TGTTTGCCCG GACAAACAAG CACCTTGTCC GGGAATCATC GACGGAAAGC
GATCGCCAGA TCCGGTTTGT GATCGACCTG TCGGGTTCCA TGAATTATGC GGAAAACGGC
GTGAGCCGAC TTCAATATGC GCAAATCCTG CTCGCGTCGC TGGCCTACCT GGGCTACATT
CAGAATGATC AGATGAGCTT ATACGGTCTG CGAGACGGTC ACGTGGAGAC GATCTGCGGG
ACGGGTTCGG GTTCGTCGGC CAAGCAGGCA TTCCAGAAAA TACTGGTAGG GCTTGAAAAA
ACGAGCGCGC AAGGCTCGTG GCAATCCGGC GGGCTGCGGC ATGCCGAGTT TCAGTCGAAA
AGGAAGGAAC AGCTTATTTT GGTGAGCGAC CTTTTTCAGG CAGGCGACGA GTGGCTTTCC
TGGGTGCGCT CGCTCGCCGG TCCGCACCGA GAAATAGTCG TTTTTCAAAT CCTGGGCGAC
CAGGAGGCCG ATTTTGATCT GAAAGGATTT TACCGTTTCA AAGACCTCGA AAGCGGGCGC
GAAATAGAGC TCGACGCGGA ATCGGCCGGG ATACGTTTTC ACGCATCCAT GCAGACCTAC
CTCGATGAAT TGAGGAATGC ATTGCAAATC CCGCACGTCC GCTTCATACG CGCACGGCTG
AGCGATCCCA TCGGAATGGT TTTGAAAGCA TTTTTAGCCC GGAAAAAGAG CGCATGA
 
Protein sequence
MQKTTGLLAS SLIKLKNLQL TGKLVSEELM LGIHSSKRSG IGIEFEQYRH YAPGDDPKRI 
DWKLFARTNK HLVRESSTES DRQIRFVIDL SGSMNYAENG VSRLQYAQIL LASLAYLGYI
QNDQMSLYGL RDGHVETICG TGSGSSAKQA FQKILVGLEK TSAQGSWQSG GLRHAEFQSK
RKEQLILVSD LFQAGDEWLS WVRSLAGPHR EIVVFQILGD QEADFDLKGF YRFKDLESGR
EIELDAESAG IRFHASMQTY LDELRNALQI PHVRFIRARL SDPIGMVLKA FLARKKSA