Gene Dfer_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2090 
Symbol 
ID8225662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2549058 
End bp2550689 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content56% 
IMG OID644929927 
Producthypothetical protein 
Protein accessionYP_003086478 
Protein GI255035857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAAA CTGATTTCAA CTGGAATGTA CCTCTGAACC TGGCGATTGC CCTGGCCCTG 
CTGGCCTTGC TGACCGTGCA ATGCGTGGTA CTGTACACGC GGCATCGGCA CTCGGGTCGG
TTGGGAGTGC GGCTGGGGTT GAATGCGTTG CTATGGGCAA GTGTGGTGGC CTGGGTGCTG
GACCCCTATT GGCCGGTGGC GGGTAAATCC GCCGTCGGAC TGCTGATAGC CGGCAATGTG
CCCCAGGAAG TGTCAGGGCG GTTGCGCGAT AGCCTTCCGG CTGCACGGGT GGTTTCCGCT
GATGAAATCG AACAGGCGGA TTTGGACACG CTGGTGATCG CCGGGCAGGA TTTTGCGCCG
GGAATTTTTG CCGGTATCCG GCAGTCGCGC GGCATGGCGG CGGTGCGATG GCTACCATAT
TTCAAATCCG GTGAGGCGTC GGACCTGCAT TGGAAAGGCG TGGTAAAAAG AGGTGGCTTG
CAGCGCATTA CAGGCGCTAT TCAATCAGCT GAGAAGCAGG TTTTACAAAT TAAATATGCG
GGGCAAACTC TGGACAGCGT GCTGCTGAAT CCGGGAAATA GCCGTTTTAC GCTCTCGTTC
GCGGCATTCG GTGAAGGGCG CACGACCACT ACGCTGCACC TGGATGGACG GACGATCGAC
ACCGTGCGTT TTTTCACGCA GCCGGACAAG CCGCTCACCG TCCGTTTCCT GGTCGATAAC
CCCGATTTCG AGACGCGAAA CCTTGCCACC TGGCTGGGTA AGCAAGGCCA TGCGGCGCTG
TATGACGCCA GATTATCCAA GGACATACGT AGTTTGCTTA AAATCAATAA TACGGGCAGT
CCCGATCTGA TCGTCACCAC ACCCTCTAAT GCAGCCCATG CAGTGGTCCG CAAGGCCGTT
AAAGACGGTA AAAGTGTGCT TTTTGTCCAA TTGAGCGACC CACCGGCTGA ACTGAGGGTG
ATTAACCAGG CCCAGGGGAC AGGCTTTGAG GCTACTAAAA TTTCCAATGA AGAAGCGGTA
CCGGTGTCGG GCATTCTCAC GGCGCAGCCT TTCCGTTTTA CCCCGCAAAG TTTCCAGGTG
AAAGCGCCGC ATTACCCTTT GGTTGTTGAA AAAACAACGG GAACGATCGC CGCCAGCCTG
CTGAACGAGA CGTTTCCCTT GCAGCTTTCG GGCGATAGCA TTGCCTACGG GAAGATTTGG
AGCGAAATTA TGGCGTACGT GCGCCCTGCG CCTGCATCCG TGCTTGAATG GGACGCTCCG
GCTTTTAAAA ACCTACCGGC TAACATCCAT TTGAACAACT TTCAACCCAT GCCCCGCTTC
GTCCGCATTG GCGCCGACAC GGTTTTTACA ACCACTTCCG CATTGAACAA CCGCTCGGCA
GCGGCCACAT TCCAGCCAAC GGAAAGCGGA TGGCTCAGTC TCCACGATTC GCTGGGGACT
GAGCTTTTTG TAGCGTCCCA CTCGCCGCTG CGGAATGCTG CGCTCATGCA GCAATTTACA
CTCTCCATTC AACCCAAAAA TGGTAAAACA GTAGCCACTA ATGAACGTTC GGTAGCAAAA
CTACCTGGCT GGGGCTGGCT TGCGTGGTTG GTATTGGTGC TTGCGCTGGT TTGGATCGAG
CCGAAAATCT AA
 
Protein sequence
MIQTDFNWNV PLNLAIALAL LALLTVQCVV LYTRHRHSGR LGVRLGLNAL LWASVVAWVL 
DPYWPVAGKS AVGLLIAGNV PQEVSGRLRD SLPAARVVSA DEIEQADLDT LVIAGQDFAP
GIFAGIRQSR GMAAVRWLPY FKSGEASDLH WKGVVKRGGL QRITGAIQSA EKQVLQIKYA
GQTLDSVLLN PGNSRFTLSF AAFGEGRTTT TLHLDGRTID TVRFFTQPDK PLTVRFLVDN
PDFETRNLAT WLGKQGHAAL YDARLSKDIR SLLKINNTGS PDLIVTTPSN AAHAVVRKAV
KDGKSVLFVQ LSDPPAELRV INQAQGTGFE ATKISNEEAV PVSGILTAQP FRFTPQSFQV
KAPHYPLVVE KTTGTIAASL LNETFPLQLS GDSIAYGKIW SEIMAYVRPA PASVLEWDAP
AFKNLPANIH LNNFQPMPRF VRIGADTVFT TTSALNNRSA AATFQPTESG WLSLHDSLGT
ELFVASHSPL RNAALMQQFT LSIQPKNGKT VATNERSVAK LPGWGWLAWL VLVLALVWIE
PKI