Gene Dfer_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2067 
Symbol 
ID8225639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2523862 
End bp2525925 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content53% 
IMG OID644929904 
ProductPeptidase M1 membrane alanine aminopeptidase 
Protein accessionYP_003086455 
Protein GI255035834 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCAC TTTTCCTGCT GATCCTTTTT CTTTTTACCA AACCCGTCCT GGCGCAGGAG 
TCGCTGCCTG ACATTTCGAC GGAGGAAATC GCGGCCATTG AAAGCAAACG GGCGGGGATC
CTGGCTGGCG AACGTTCAAT GCGCGTAAAG GCTTCCAATA ATTTTGATGT AAAATACTAC
CGCTGCGAAT GGGAAGTCGA TCCGGCGTCG TACTATATCA AAGGTAAAGT GACGCCGCAT
TTTACGATGA ATGCGGCAGG AAATGTGATC ACACTCGACC TCGCAAGCGG GCTCACGGTG
GCATCCGTAA AGCAGCGCGG CAGTGATGTT GCTTTCTCGC ACGTCGGCGA TGCGCTCATG
ATCACCCTCC AAAACCCACT TTCGCAAGGC GTTAAAGATT CGCTCACGAT TGCGTATGAG
GGTATTCCGC CCGGTAATCA TGGCGCGTTT GTAACATCCG TGCACGGACC GGCCAGTACG
CCTGTTCTGT GGACGTTGAG CGAGCCCTTC GGCAGCCGCG ACTGGTGGCC CTGCAAGAAC
GGCCTCGACG ATAAGGCCGA TTCCGTCGAC ATTTTTCTCA CGCATCCGGC TGTGTACAAA
GCAGCCTCCA ACGGACTGTT GCAGGCCGAA ACCGCTCTTT CCATCAACCT CACCCGCACA
CACTGGAAGC ACCGCTATCC GATTGCCAGC TACCTTGTCG CATTTGCCGT AACGAACTAT
AGTGTGCTGG ATAACAGTGT CGTAATTGGC GGGACGAGCG TGCCTTTCAA GACTTATTGT
TACCCCGAGA GCCAGTTTAA TTTCCAGAAC GGCGCCCAAA ATGCCCTCAA TGCGATGGTG
CAGTTCAGCA ACCTGTTTGG CGATTATCCG TTTAAGAATG AAAAATACGC GCATGTGCAA
TTCGGCTGGG GCGGCGGCAT GGAACACCAA ACCTGCTCAT TCATGGGCAG TATGGCCGAA
ACGCTGATCG CCCATGAGCT TGGACATCAA TGGTTTGGAG ATAAAATTAC CTGCGGCAGC
TGGGAGGATA TCTGGCTCAA TGAAGGCTTC GCGACGCACC TGGCGAGCAT TTATAATGAG
GCTAAATACC CACTCAACAC AAAATTCACC CGCACCAGCG AAGTCAACAC CATCACTTCA
CAGCCCGGCG GCTCGGTTTG GGTAAATGAT GTGAACGACG CGGGCCGCAT TTTCAATAAC
CGGCTGAGCT ACCTCAAAGG CTCGCACCTG CTCTATATGC TGCGCTGGAT TCTCAGCGAC
GCCACGTTCT TCTCCGCGGT GAAAAATTAT ATCAATGATC CCTCGCTGGC CTACGGCTAC
GCAACCACCG CTCATCTCAA AAGCCACCTC GAAGCGGCCA GCGGCAAAGA TCTGACCTAT
TTTTTCGACC AATGGTTTAC CGGGCAGGGC TACCCGTCGT ACCAGGTGGA ATGGTATCCG
ATCGGTAACG CTGTGCAGGT GAGGCTCGAA CAAACGCGGT CGCATGCGTC GGTGAATTTT
TTCCAGCTGC CCGTGCCCCT GCTATTCCGC AACAGCCAGA CTAACCAGCA GAAACTGGTC
GTACTCGACC ACACGGTGAG CGGCCAGCTC TTTTCGGAAA ACCTGGGTTT TGAGGCCACG
GAGGTCGTTT TCGATCCTGA TGTGTGGCTG ATCACGCGCA ACAATACGAT CACCAAATCG
TCGGGGCAAT TGCCGGTGGT TTTCAGCAGT TTTGAGGTAC AATGCCGCGG CAATGGCGCA
AGGCTCACTT GGCAAACGAT CGAGGAGGTG GGAGCCGATT ATTTTGAAAT ACAAGGAAGT
GACGACGCCC GTCAATGGCA GGTTTTGGGG ACTGTCCGTG CGTTTGGTAA TTCAAAAGCT
ACCAACGATT ATTCTTTTAA TGTCGAAGCG TCTTCTTCGC GTAATTTTTA TCGGGTGAAA
GAGTACGACC TGGATGGCAA AACCCAGGAG ACCCGGATTT TGGTGGCCAA ATGTGGAAAG
GAAAAGAGTG ATTGGGCGGT ACATCCTAAT CCGGCAATCG ATTTTTTTTA CATTAACCCA
TTCCAACAAA AATCCGATTC CTGA
 
Protein sequence
MRALFLLILF LFTKPVLAQE SLPDISTEEI AAIESKRAGI LAGERSMRVK ASNNFDVKYY 
RCEWEVDPAS YYIKGKVTPH FTMNAAGNVI TLDLASGLTV ASVKQRGSDV AFSHVGDALM
ITLQNPLSQG VKDSLTIAYE GIPPGNHGAF VTSVHGPAST PVLWTLSEPF GSRDWWPCKN
GLDDKADSVD IFLTHPAVYK AASNGLLQAE TALSINLTRT HWKHRYPIAS YLVAFAVTNY
SVLDNSVVIG GTSVPFKTYC YPESQFNFQN GAQNALNAMV QFSNLFGDYP FKNEKYAHVQ
FGWGGGMEHQ TCSFMGSMAE TLIAHELGHQ WFGDKITCGS WEDIWLNEGF ATHLASIYNE
AKYPLNTKFT RTSEVNTITS QPGGSVWVND VNDAGRIFNN RLSYLKGSHL LYMLRWILSD
ATFFSAVKNY INDPSLAYGY ATTAHLKSHL EAASGKDLTY FFDQWFTGQG YPSYQVEWYP
IGNAVQVRLE QTRSHASVNF FQLPVPLLFR NSQTNQQKLV VLDHTVSGQL FSENLGFEAT
EVVFDPDVWL ITRNNTITKS SGQLPVVFSS FEVQCRGNGA RLTWQTIEEV GADYFEIQGS
DDARQWQVLG TVRAFGNSKA TNDYSFNVEA SSSRNFYRVK EYDLDGKTQE TRILVAKCGK
EKSDWAVHPN PAIDFFYINP FQQKSDS