Gene Dfer_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2062 
Symbol 
ID8225634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2514270 
End bp2517812 
Gene Length3543 bp 
Protein Length1180 aa 
Translation table11 
GC content55% 
IMG OID644929899 
Productmolybdopterin oxidoreductase 
Protein accessionYP_003086450 
Protein GI255035829 
COG category[R] General function prediction only 
COG ID[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAT CCCCAACATC CTATAAATCG ACCTGCTGTT ACTGCGGCGT GGGCTGCGGG 
GTCGTGGTGA CGAAAGAAAG TAACGGCCAG CTCAGCCTGG AAGGCGATAA GGAGCATCCG
TCGAACAAAG GAATGCTGTG TTCCAAAGGC ATGAACCTGC ATTACACGGT GATGGACCAG
TCGGACCGGC TGCTGTATCC GCAGGTGCGG CTCAACCGCT CGATGCCTTT GCAGCGCGCG
ACCTGGGACG AGGCGCTGGA ACGCACAGCG GCTGTTTTTA AGACATTAAT CAAAAAATTC
GGGCCCGATT CGGTGGCATT TTATGTCTCC GGGCAATGCC TCACCGAGGA GTATTACCTG
GTCAACAAGC TGATCAAGGG CTTCATCGGG TCCAACAATA TCGACACCAA CTCCCGCCTG
TGTATGAGCT CGGCGGTGGT GGGTTACAAG CTGTCACTGG GCGAGGATAG CGTTCCCGTT
TGCTACGACG ACATCGAAGC GGCCGATGTC ATGTATGTAA CCGGCGCTAA CCCGGCCTGG
TGCCATCCCA TTATCTGGCG GCGCGTGGAA GCGCATAAAA CGGCGAATCC GGCTACCAAA
ATTATCTGCG TGGACCCGCG TGTAACCGAC ACCGCCCGCT CGGCCGACCT GCATTTGCAG
ATCCGCCCGG GCACCGACAT TGTCCTCAAC AACGCGATCG GTCGTTTGCT GATCGAAAAT
GATTACCTCG ATGAGCGGTT TATTGCAGAC CACACCGATG GTTTCGAATT ATTCCGGCTA
CAAGTAATGC AGCGCACTTT GGCGGAAGCG GCCGACATTT GTGGTGTCCC TTCCGCCGAC
ATTGCCTTAG CCGCCGAATG GATCGGCCGT TCGAAAGGCT TTCTCTCCTT TTGGACCATG
GGATTGAACC AATCGGTAAT CGGGGTAAAC AAAAACCTTT CGCTCATCAA CCTGCATTTG
ATTACCGGTA AAATCGGCAA ACCGGGTAAT GGGCCGTTCT CGTTGACCGG CCAGCCGAAT
GCCATGGGCG GTCGGGAAAC GGGTGGCCTT GCCAACATTC TCCCGGGCCA CCGCGAGGTG
GTGAATGCCG CCCACCGCGA GGAAATGGAA CAATTCTGGA ACACGCCCGT CCGCATTGCC
GACAAGCCCG GCCTTACCGC TACCGAAATG TTCGAAGCAT TGGCCGATGA CAAACTGAAA
GCGATCTGGA TCATCAACAC CAACCCGCTG GTGAGCATGC CCGACATGAA TGCCGTGGAA
AGCGCATTGA AAAAATCGCG TTTTGTGGTG GTGCAGGACG TTTCTAACCG CGCCGACACC
GTGCATTTCG CCGACGTGGT ACTGCCCGCG GCGGCCTGGC TGGAAAAAGA CGGCAGCATG
ACCAACGCCG AACGCCGCAT TACCTATCTT CCCAAAGTGC TCGACGCGCC GGGAGAAGCC
CTGCCCGATT CGGAAATCCT CTGGCGTTTT GCCCAGAAAA TGGGCTTTGA AAAAGCATTT
AATTACAAAA CCAATGCCGA TGTGTATGCT GAATATGTGA AGGTTACCAA AGGAACGACC
ATTGACGTAA CCGGCGTAAG CCATCAATTA CTGAAAGAAA AACGCAGCGT CCAATGGCCG
CTTTCGTCGC TGGATGCCGA GCGTTCCGCA GAAGTGCGCC AGCCTGGCAC CAAACGCCTT
TTTACCGACC ATCAGTTTTA TACCAAAAAT AAAAGAGCGC AAATCCATGC CGTACCGGAT
GAAAACACAT CCGAACCGAC GGATAACCAG TTCCCATTGG TTTTAACGAG TGGAAGAATC
CGCGACCAGT GGCATACCAT GACCAAAACG GGCCGTGTCG CGAAATTGAA CAAGCATATT
CCCCAGCCTT TCCTGCAAAT TCACCCCGTC GACGCGCAGG AACGCGGCAT TCAGGAAGGC
AGTCTGGTGA CGGTGAGCAG CCGTCGCGGG GAAGTGCGTG TGAAGGCGCA GATTACCACG
GATGTCCGCA AAGGGCTGTG CTTTTTGCCC ATGCATTGGG GAAAAATATT GGGTAGCAAC
CTCGTGCGCG CCAACAACCT CACTAGCCCG CTGGTTGACC CGAAATCCAA AGAACCGGAT
TTCAAGTTTT CGGCTGTGCA GGTAGCATTG TATCAAAAAC CAGTTGAAAA AATCATCATT
ATCGGCGCAG GATCGGCTGG TTTGGGCTTT ATCAATGCCT ACCGCCAGCT CAATGCGAAC
GATGAGATCC ATGTTTTTTC CAAAGAAATA TATCCGTTTT ATAACCGGGT AATGCTGCCC
GATTACATCA GCGGCTCGCA AACCTGGGAA CAGCTCGTGA AGCTGCGCGA GGACCAGTTT
GCCGAAAACC GCATTACCGT GCATAAGGGC GTAAGTATCA TGCACATCGA CCGGAAACAC
AAAACCGTGA TCGATAGCAA CGGATTTGAA CACCATTACG ACAAGCTGAT CCTCGGCATG
GGCAGCAAGG CGTTCATGCC GAAAGGCGTG CCCAACCTGC CCGGCATTTT CAATATGCGC
TCGCGGCTCG ATGCGGACTC GTTGCTGCCG TTTTTGAAAC AGCCCGACCC GCACGCGGTG
ATCGTCGGCG GGGGAATTCT GGGGCTGGAA TTAGCGGCAT CATTCCGCGA AATGGACGTA
AAAGTGACCG TGATCCAGCG CAGCGGCCGT TTTATGGAGC GCCAGCTTGA CCCGCTCGCG
AGCGAACTGC TTTACCAGGA GCTGCTCGAC CGGGGAATCG AATGTTATTT CAATGATGAG
GTGGCTACCT TCTCGGGTTC GGACACCGTG GAAGGGATCA GGCTGAAATC GGGACGGAAG
ATTGATTGTC AGGTGGTTGT ACTGGCTATC GGCACCGTCC CGACCATCGA CCTCGCCAGA
AACACCGGCC TTGAATGCAA GCGCGGCGTG GTAGTGAACG ATTACATGCA AACTTCCGAC
CCGGATGTTT ACTCGGCCGG TGAAATCGCC GAATGGAACG GACAAATGTG GGGCATTACC
CTCGCCGCCG AACAGCAAGC CGAAGTGATC GCCAACTACC TCGCGGGCGA CATTTCGCAA
CCGTACAAAG GAAGCACCTC GATGAACATC CTGAAAATGG ACGGTCTGCA CTTGTGCAGC
ATCGGCATGA CCGACGCCCC GGCCAACGAT CCGGCCTATG AGCAAATCGT ATTCATCGAT
AAATCAAAGC GTTATTACAA AAAATGCATC GTGCACCGCG ACAAGCTCGT AGGTGCGATC
CTGATAGGCG ATAAAAACGA ATTCCTGGAA TTCCGCGACC TCATCTCGGG CGGCGTCGAA
CTTTCGGAAA AACGCCTGCA ACTCCTCCGC GCGAGCCAGA AAGCCGAGCC GATGATGGGA
AAACTCGTAT GCTCCTGCAA CAATGTCGGA CAAGGAAACC TGGAAAATGC CATTGCCGGC
GGCTGCGGCG ATTTCCAGAA GCTCTGCCAG ACGACGGGCG CCGGGACGGG CTGCGGCTCA
TGCCGGCCGG AGGTGCGGTC TATTTTGGAA AAGGCGTTGG AAAATAGTTT GGTAGCATTG
TAG
 
Protein sequence
MKPSPTSYKS TCCYCGVGCG VVVTKESNGQ LSLEGDKEHP SNKGMLCSKG MNLHYTVMDQ 
SDRLLYPQVR LNRSMPLQRA TWDEALERTA AVFKTLIKKF GPDSVAFYVS GQCLTEEYYL
VNKLIKGFIG SNNIDTNSRL CMSSAVVGYK LSLGEDSVPV CYDDIEAADV MYVTGANPAW
CHPIIWRRVE AHKTANPATK IICVDPRVTD TARSADLHLQ IRPGTDIVLN NAIGRLLIEN
DYLDERFIAD HTDGFELFRL QVMQRTLAEA ADICGVPSAD IALAAEWIGR SKGFLSFWTM
GLNQSVIGVN KNLSLINLHL ITGKIGKPGN GPFSLTGQPN AMGGRETGGL ANILPGHREV
VNAAHREEME QFWNTPVRIA DKPGLTATEM FEALADDKLK AIWIINTNPL VSMPDMNAVE
SALKKSRFVV VQDVSNRADT VHFADVVLPA AAWLEKDGSM TNAERRITYL PKVLDAPGEA
LPDSEILWRF AQKMGFEKAF NYKTNADVYA EYVKVTKGTT IDVTGVSHQL LKEKRSVQWP
LSSLDAERSA EVRQPGTKRL FTDHQFYTKN KRAQIHAVPD ENTSEPTDNQ FPLVLTSGRI
RDQWHTMTKT GRVAKLNKHI PQPFLQIHPV DAQERGIQEG SLVTVSSRRG EVRVKAQITT
DVRKGLCFLP MHWGKILGSN LVRANNLTSP LVDPKSKEPD FKFSAVQVAL YQKPVEKIII
IGAGSAGLGF INAYRQLNAN DEIHVFSKEI YPFYNRVMLP DYISGSQTWE QLVKLREDQF
AENRITVHKG VSIMHIDRKH KTVIDSNGFE HHYDKLILGM GSKAFMPKGV PNLPGIFNMR
SRLDADSLLP FLKQPDPHAV IVGGGILGLE LAASFREMDV KVTVIQRSGR FMERQLDPLA
SELLYQELLD RGIECYFNDE VATFSGSDTV EGIRLKSGRK IDCQVVVLAI GTVPTIDLAR
NTGLECKRGV VVNDYMQTSD PDVYSAGEIA EWNGQMWGIT LAAEQQAEVI ANYLAGDISQ
PYKGSTSMNI LKMDGLHLCS IGMTDAPAND PAYEQIVFID KSKRYYKKCI VHRDKLVGAI
LIGDKNEFLE FRDLISGGVE LSEKRLQLLR ASQKAEPMMG KLVCSCNNVG QGNLENAIAG
GCGDFQKLCQ TTGAGTGCGS CRPEVRSILE KALENSLVAL