| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2058 |
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| Symbol | |
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| ID | 8225630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2507460 |
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| End bp | 2509931 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929895 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_003086446 |
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| Protein GI | 255035825 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGGCT ACAAATTCTG TGAAAAGCTC CTCTCGCGAA AAAAAGAAGG ACAGGAATTT
TCCATCACGG TATTCGGCGA AGAGCCCCGT GCTGCCTACG ACAGAGTACA TTTGAGCGAG
TTTTTTGCAG GGAAGTCGGC AGATGACCTT TCCATGGCCG GAGTAGACTG GTATGCAGAA
AACGGGATAC GGCTGTTTTT GTCCGATCCC GTGGTGGACA TCGACCGGGA GGAGAAACTG
GTGCGTTCAC ACCATGGACA TATAGTATAT TATGACTACC TCATCATGGC AGCCGGCTCT
GGGGCATTCG TTCCGTCTAT TCCGGGCGTC GAGAAGGATG GGGTGTTTGT GTATCGTACC
ATCGAAGATC TGGAACTGAT CCAGTCTTAT GCCAAAAAGG CGAGAAAGGG TGCCGTGCTC
GGCGGCGGTT TGCTGGGCCT GGAAGCGGCC AAAGCATTGC TGGACCTCGG TTTGGAAGAA
GCGCATGTGG TGGAATTTGC TCCGCGACTG ATGCCGAGGC AGATTGACGA TGCCGGTTCG
CGCATGCTGC AAAGCCAATT GGAATCTCTT GGTTTACAAA TACATTTATC CAAAAGCACG
CAGGAAATCA AAGGCGACGA CCGCATTGAA GGCATGCAGT TTGCCGACAA TAGCTTCCTG
GACGTGGATA TGCTCGTGAT TTCCGCGGGT ATCCGCCCGC GCGACGAAGT GGCCAAAATC
GCAGGCCTCG AAACGCACCC ACGCGGCGGC ATCATCGTCA ACAACCAGCT CCAAACCTCC
GATCCATTCA TTTTCGCGAT CGGGGAATGT GCATTGGCGC ACCATATGAT CTACGGCCTC
ATCGCGCCGG GCTATGAAAT GGCCGACGTG GTGGCGACCA TGCTGACCGG CGGAGAAAAG
GAATTTCTTC CCTACGACAT GTCGACCAAG CTGAAACTCA TCGGCACCGA CGTGGCGAGC
TTCGGAGACC CGTTTGTAGA AGAGCCGGCT TGCCGCACGA TCCGTTATGA AAATAAGGCT
AAGGGCATTT ACAAGCGCAT TAATGTAAGC TCCGACGGCA AAACTTTGCT AGGCGGTATC
CTCGTAGGCG AGGCCGAGCA GTACAACATG CTCCTGCAAA CCTGCAAGAA CAAAACCATT
CTCCCGCCCG ATTCCGAAGA CCTGATCCTG GGCTCCCGCG GGGGCGAGGA AGCGGGCGCA
GGCGTAATGA GCCTCCCCGA CGACGCGCTC ATATGCTCGT GCGAGGCCGT TACCAAAGGC
ATGATCTGCC ACGAGGTAGG TGAAAACGGA CATCATACCG TGGATGCATT GAAAAAATGC
TGCAAGGCCG GTACCGGCTG CGGCGGCTGT ATCCCGATGG TGAAAGACCT GATTTCGGGG
GTGATGAAGG AAAAGGGCGT ATACGTACGG AATGTCATTT GCGAGCATTT CGACTATTCG
CGCCAGGAGC TGCTCGATTT GGTAAAAATG AATGGCCTGA AAACCTACGG CGCCGTGCTC
GACCATCACG GCAAAGGCGA TGGCTGCGAA GTGTGCAAGC CGCTGGTGGT CTCGTTGCTG
GCCAGCCTCT GGAATGAAAA TATCCTGGCA AAAGACCGCG CCGTGGCGCA GGATTCGAAC
GACCGCTACC TGGCAAATAT TCAGAAAGGC GGCACATATT CCGTTGTGCC GCGGATTCCT
GGCGGTGAAA TTACGCCTGA GAAACTGATC GTGATCGGTC AGGTGGCGCA GAAATATAAT
TTGTACACCA AAATCACCGG CGGCCAGCGT ATCGACCTTT TCGGCGCGCA CCTGGGCGAC
TTGCCGGACA TTTGGGAAGA GTTGATCGAC GCCGGTTTCG AAAGCGGCCA TGCTTATGGT
AAATCTTTAA GAACCGTAAA AAGCTGCGTT GGCTCCACCT GGTGCCGTTT CGGCGTGCAG
GATTCGGTGT CGTTTGCGAT TGAAGTGGAG GACCGTTACA AAGGCCTGCG CTCACCGCAT
AAACTGAAAT CTGCGGTTTC GGGCTGCGTG CGTGAATGTG CCGAGGCGCA AAGCAAGGAT
TTTGGCATTA TCGCTACCGA AAAAGGCTGG AACCTGTTTG TGTGCGGCAA TGGAGGCTCC
AAACCGCAGC ACGCCCAACT GCTCGCAACG GACGTGGATA AAGAAACCTG TCTCCGCCTC
ATCGACCGCT TTTTGATGTT TTATATCAAA ACCGCCGACC CGCTTACCCG GACCGCTACA
TGGCTCAACA AAATGGAAGG AGGCATGAAT TACCTCAAAG CGGTGGTCGT GGACGACGTG
CTGGGCATCG CAGGAGAACT CGAACGCGAT ATGCAAAACC TGATCGACGT CTATAAATGC
GAATGGCGCG AGGTGGTGGA AAGCCCCGAG CTCCGCAAAC GCTTCACGCA CTTTGTGAAC
ACGCCTATGA AAGACCCCAG CATTACGTTC GCGGACATGC GCGAGCAAAA GCGGGCCACC
GAATGGGCAT AA
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| Protein sequence | MVGYKFCEKL LSRKKEGQEF SITVFGEEPR AAYDRVHLSE FFAGKSADDL SMAGVDWYAE
NGIRLFLSDP VVDIDREEKL VRSHHGHIVY YDYLIMAAGS GAFVPSIPGV EKDGVFVYRT
IEDLELIQSY AKKARKGAVL GGGLLGLEAA KALLDLGLEE AHVVEFAPRL MPRQIDDAGS
RMLQSQLESL GLQIHLSKST QEIKGDDRIE GMQFADNSFL DVDMLVISAG IRPRDEVAKI
AGLETHPRGG IIVNNQLQTS DPFIFAIGEC ALAHHMIYGL IAPGYEMADV VATMLTGGEK
EFLPYDMSTK LKLIGTDVAS FGDPFVEEPA CRTIRYENKA KGIYKRINVS SDGKTLLGGI
LVGEAEQYNM LLQTCKNKTI LPPDSEDLIL GSRGGEEAGA GVMSLPDDAL ICSCEAVTKG
MICHEVGENG HHTVDALKKC CKAGTGCGGC IPMVKDLISG VMKEKGVYVR NVICEHFDYS
RQELLDLVKM NGLKTYGAVL DHHGKGDGCE VCKPLVVSLL ASLWNENILA KDRAVAQDSN
DRYLANIQKG GTYSVVPRIP GGEITPEKLI VIGQVAQKYN LYTKITGGQR IDLFGAHLGD
LPDIWEELID AGFESGHAYG KSLRTVKSCV GSTWCRFGVQ DSVSFAIEVE DRYKGLRSPH
KLKSAVSGCV RECAEAQSKD FGIIATEKGW NLFVCGNGGS KPQHAQLLAT DVDKETCLRL
IDRFLMFYIK TADPLTRTAT WLNKMEGGMN YLKAVVVDDV LGIAGELERD MQNLIDVYKC
EWREVVESPE LRKRFTHFVN TPMKDPSITF ADMREQKRAT EWA
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