| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2057 |
|---|
| Symbol | |
|---|
| ID | 8225629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2507063 |
|---|
| End bp | 2507416 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644929894 |
|---|
| Product | nitrite reductase (NAD(P)H), small subunit |
|---|
| Protein accession | YP_003086445 |
|---|
| Protein GI | 255035824 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGA TCACTGACAC AATCAATGCA GTAACCTGGC ACATGGCATG CTACGTCGAC
GATATCCCTG AGGACGGCGG CGGCTGTGCG TTTATCAGCG GCAAGCAAAT CGCCATTTAC
AATTTTTCGA GAAGGGGAGA ATGGTATGCT ACCGATAACC AATGCCCGCA CCGCCAGCAA
ATGGCACTGT CGCGCGGGAT GATCGGCAGC CAGGGCGAAG AACCCAAAGT GGCTTGTCCT
TTTCATAAAA AAACGTTTTC ATTGCAAACC GGACAGTGCC TCAACGACGA CGAATACCGG
ATCAACACTT TCCCGGTGAT GGTGAAAGAA AACCGCGTTT ACGTCGGATT GTGA
|
|---|
| Protein sequence | METITDTINA VTWHMACYVD DIPEDGGGCA FISGKQIAIY NFSRRGEWYA TDNQCPHRQQ
MALSRGMIGS QGEEPKVACP FHKKTFSLQT GQCLNDDEYR INTFPVMVKE NRVYVGL
|
|---|
| |