| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2006 |
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| Symbol | |
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| ID | 8225578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2448738 |
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| End bp | 2449202 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929843 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_003086394 |
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| Protein GI | 255035773 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.899391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.48043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCTTAA TTTCTTTTAT CAAAGGTGTC GGAGAAAAAG TTTTCGGCAA GGATACCCCT
GCGGCTGCCC CCACCCCGGA AGCGGAACCA TTGCGCGCCA GCGCGCTGCT CGCGCACGTG
AAGTCACTCG GGCTTGCTTA TAACAACCTC ACCGTAAGAA CATCGGGCGA CACCGTTACC
CTCGACGGCG AGGTGGCCAA ACAGGAAGAC GCCGAAAAAA TAGCATTGGC CGTCGGCAAT
GTGGAAGGCG TGGAAGTGGT GGACAACCGC CTGAAAGTAG CCACTCCCGA ACCGGAAGCA
ACCTATCACA CCGTTGTGAA AGGCGACACA CTTTCCAAAA TCGCCCAGAC CGTCTACGGC
GACATGATGA AATACCCCAT CATTTTCGAG GCAAACAAAC CCATGCTGAA AGACCCCGAC
CTGATTTATC CGGGGCAGGT GTTGCGGATT CCGGGGTTGA AATAG
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| Protein sequence | MGLISFIKGV GEKVFGKDTP AAAPTPEAEP LRASALLAHV KSLGLAYNNL TVRTSGDTVT
LDGEVAKQED AEKIALAVGN VEGVEVVDNR LKVATPEPEA TYHTVVKGDT LSKIAQTVYG
DMMKYPIIFE ANKPMLKDPD LIYPGQVLRI PGLK
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