Gene Dfer_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2002 
Symbol 
ID8225574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2443053 
End bp2444585 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content52% 
IMG OID644929839 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003086390 
Protein GI255035769 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACTT CCGCTGTGCA AAAGGAATAT GATTTTGTGA TTGTTGGGAG CGGACTGGGC 
GGTCTGGCTT GTGCCAACAT CCTGGCAAAG GAAGGTTATA GTGTGGTGGT ACTCGAAAAA
AACCATCAGA TCGGCGGACA TTTGCAGGTT TACAGCCGCG ACAAGACGAT TTACGACACC
GGCGTACATT ATGTAGGCGG CCTCGACGAG GGCGAGAATC TCTACCAGTT TTTCAAATAT
TTCGGCATTC TCGATAAACT GAAACTCAAA CGGCTCGACG ACGACCGGTT CGATGTGATC
CGCTTCGAGG ACGGCTCCGA ATATGCCTAC GCGCAGGGAA TGGAGCATTT TGAGCAAAAA
CTGATCTCCT ATTTCCCCGA TGAAGCAGCC GCTATCCGGG CCTACTGCCA AAAAGTGACG
GATACCTGTG CGAAATTCCC GCTTTACAAC CTGGAAACGG CAGGCGACAA CTACCTGAAC
GACGAGAGCA TCCTCACCCT GAACGCCTAC GATTACATTG CATCCCTCAC CGACAACATC
CGTTTGCGGA ATGTGCTCGC GGGAAACAAC TTATTGTATG CGGGTGTGAA GGAGAAAACG
CCGTTTTACG TGCACGCGCT CATTCTCAAA AGCTACCTCA ACGGTGCCTA CAAATTCGTG
GACGGCGGCT CGCAGATCGC GATCCAGCTC AGCCGTGCGG TAAGGCAGCA CGGCGGGGAG
ATTTACAAGC ATAAAAAGGT AACCGGCGCG CATTACAACG AAAAGGGGCA CATTACCGAA
GTGGTGTGCG AGAATGGCGA GACTTTCCGC GGAAGGGAAT TTATCTCCAA TATCCACCCG
TCGGTCACGA TCGACGTTTT CGGCCCGGAA CGGTTCCTGA GTGTGTACCG CGCCAGAGTG
CAGGCGCTGG AAAACAGTGT TTCGACCTTC CTGGTGCATA TTTCCTTCAA AGACAACACC
TTCGAATACC TGAATTACAA CATTTACCAG CACCATATCG ACAACGTTTG GGAAGGTGTA
TCGTACGACC AGGCTACCTG GCCGCAGACC TATTTCATTT GCACGCCTTC GATCTCCAAG
AAAGGCGAAT ACGCCGATTC GATGTCGATC ATGTGTTACA TGGATGCATC GGAAACGGCA
GCCTGGGCCG ATACATTCAG TACGGTGGCC GAGCCCGGGG CGCGGGATGC GGCTTACGCG
CAGTTCAAAA AAGATAAGGA AGCGCTGGTG CTGGCCCGGA TTGAGACGGT ATTTCCCGGC
ATTTCGGCGA AAATCAAATC GGTGCACAGC GCATCGCCGC TGACCTTCCG GGATTACATC
GGTAACGGAA ACGGCACGAT GTACGGCATC GTCAAAGATT CGACATCGCC CATGAAAACG
CGGATCAACA CGCGCACCAA AATCCCGAAC CTGCACCTGA CGGGCCAGAA TATTTCCCTG
CACGGGATAT TAGGGGTGAC CGTCAGCGCT TTTGTCACGT GCTTCTCATT TTTAGATAAA
GAAAAACTCA TTCAAAAAGT AAAAAACGCC TGA
 
Protein sequence
MQTSAVQKEY DFVIVGSGLG GLACANILAK EGYSVVVLEK NHQIGGHLQV YSRDKTIYDT 
GVHYVGGLDE GENLYQFFKY FGILDKLKLK RLDDDRFDVI RFEDGSEYAY AQGMEHFEQK
LISYFPDEAA AIRAYCQKVT DTCAKFPLYN LETAGDNYLN DESILTLNAY DYIASLTDNI
RLRNVLAGNN LLYAGVKEKT PFYVHALILK SYLNGAYKFV DGGSQIAIQL SRAVRQHGGE
IYKHKKVTGA HYNEKGHITE VVCENGETFR GREFISNIHP SVTIDVFGPE RFLSVYRARV
QALENSVSTF LVHISFKDNT FEYLNYNIYQ HHIDNVWEGV SYDQATWPQT YFICTPSISK
KGEYADSMSI MCYMDASETA AWADTFSTVA EPGARDAAYA QFKKDKEALV LARIETVFPG
ISAKIKSVHS ASPLTFRDYI GNGNGTMYGI VKDSTSPMKT RINTRTKIPN LHLTGQNISL
HGILGVTVSA FVTCFSFLDK EKLIQKVKNA