| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1971 |
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| Symbol | |
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| ID | 8225543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2407248 |
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| End bp | 2408132 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644929808 |
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| Product | cyclase family protein |
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| Protein accession | YP_003086359 |
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| Protein GI | 255035738 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1878] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.674736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCACA GGGTAGTTTT TGATTTTGAC ATTGCATTTA CCAACGGCGG CGGCATTCAG
GGGCAGGATT TCCGGCTCGA CATTGCGGAT GAAACCATTT CGGACGCCGA ACTGGCCGAC
TATATCGTAA AAGACCTTCG CCTGCTCATG GTGGGCAAGG TTACGATTCT TGACAAGTTT
TACATTCAGG AACCGCACAA GCGCAAGCCC GTGAACCTGA TCTCAACGGA ACACCTGGTG
GACCTGAGCC ACACGATTTT CGACGGCCTG GTCACCTACA AAGGGCTGCC TGCGCCGGTG
ATTTGTGATT TTCTGAGCCG GAAGGATTCG AAAGGGAAAT ACGAAGAAGG AACTGAATTT
CAGATCGGCA AAATCGAAAT GGTGAGCAAT ACCGGCACGT ACATCGACTG CCCGTTTCAT
CGTTACGCGC ATGGCAAGGA TCTTTCCGAA GTGGAGCTGG AAGCATTTGC GAACCTCGAC
GCGGTGACGA TCGATGCCAC CGGAGCATTC GAAATCGGGA TCGGATTTTT TCAAAACCTC
GAAATCCGTA ACAAGGCGGT CATGGTGCAC ACCGGCTGGT CGAAGCACTG GAACACGGAA
GCCTATTTTG AAGATCACCC GTTCCTCACG CGCGAAGCCG CCGAATACCT GCGCGACTGC
GCCGTGAAGC TCGTGGGGAT CGACAGCCAC AATGTCGACG ACACCCGTGG CAACAGCCGC
CCGGTACACA CCACGCTGCT CGGAGCCGAA ATCCTGATCG TCGAACATCT CTGCAATCTG
GATAAACTGC CGGCCTCGGG TTACCTGTTC AGCGCGGTAC CGCCTAAGTT CAAGGGCGTT
GGCACATTTC CGGTACGCGC ATTTGCCACG TTGACCAACC CCTGA
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| Protein sequence | MDHRVVFDFD IAFTNGGGIQ GQDFRLDIAD ETISDAELAD YIVKDLRLLM VGKVTILDKF
YIQEPHKRKP VNLISTEHLV DLSHTIFDGL VTYKGLPAPV ICDFLSRKDS KGKYEEGTEF
QIGKIEMVSN TGTYIDCPFH RYAHGKDLSE VELEAFANLD AVTIDATGAF EIGIGFFQNL
EIRNKAVMVH TGWSKHWNTE AYFEDHPFLT REAAEYLRDC AVKLVGIDSH NVDDTRGNSR
PVHTTLLGAE ILIVEHLCNL DKLPASGYLF SAVPPKFKGV GTFPVRAFAT LTNP
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