Gene Dfer_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1961 
Symbol 
ID8225533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2396799 
End bp2397593 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content52% 
IMG OID644929798 
ProductO-methyltransferase family 3 
Protein accessionYP_003086349 
Protein GI255035728 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.282788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAG CGTTAGATAA TCTCCGTTTG TACGCAGGTG TTGTAAGGAG AGTAGGATAC 
ACCCTCACAT TAGGCATGTT GAACTCCGGT TCCCGCGACG AACTGCTGAA ACTTTACAAT
AGCTACAACG GTCACTCGCC CTCCGGCCAA GACACCCCCG TCGACCCGTT TATCATCCCC
AAAACCGATG TTTTTGAGCT TTTCGGCAAC GACACGGCCG CCTATGAGGG CGTCTACGAA
TGCGGTTTCG GGCATACGAC GGAGTTTGAA CTCAAAGTGA TCAGTAACCT TGTCAAAAAA
TGGAACCCGC GCCGGATTTT TGAAATAGGC ACATTTCAGG GGCGCACCAC ATTGAATATG
GCGCTTAACA GCAGTGCTGA TACAGAGATT GTTACGCTCG ATCTGCCCGC GGACGAACTG
GATGCGACCA AAATGGAAAT CGAGGAAGGC GAGGTGAGAT ATGTGAAAAA AGAGGTCTCG
GGCGAGCGCT TTATCGGGCA TCCGGCAGCG GCAAAAATAC GGCAGATGTT CGGCGATTCG
GCGTCGTTCG ACTTTACCGA TTACGCTAGC TCCGTCGACG TTGCATTCAT AGATGGCTCC
CACGCCTACG AATATGTACT CAACGACAGC GAAAAAGTCC TCACCATCAT GCGGAGAGGC
GGCCTTATGA TCTGGCACGA CTACACCAAC TGGCCCGGCG TATGGACCGC CCTGAATGAA
TTGTACCAGA AAGATGTGCG TTTCCGCGGC ATCAGGCACA TCGGCGGCAC CAGCATTGCA
ATCCTGACGA TTTGA
 
Protein sequence
MSKALDNLRL YAGVVRRVGY TLTLGMLNSG SRDELLKLYN SYNGHSPSGQ DTPVDPFIIP 
KTDVFELFGN DTAAYEGVYE CGFGHTTEFE LKVISNLVKK WNPRRIFEIG TFQGRTTLNM
ALNSSADTEI VTLDLPADEL DATKMEIEEG EVRYVKKEVS GERFIGHPAA AKIRQMFGDS
ASFDFTDYAS SVDVAFIDGS HAYEYVLNDS EKVLTIMRRG GLMIWHDYTN WPGVWTALNE
LYQKDVRFRG IRHIGGTSIA ILTI