| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1955 |
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| Symbol | |
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| ID | 8225527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2390681 |
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| End bp | 2392687 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644929793 |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | YP_003086344 |
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| Protein GI | 255035723 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.10284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGT CAATCGGAAA GAAGAAAACA AACGCAACCA TCGAACCTGC CGAAGATGCC
GGCACGCCTG TCGCGGCCCA ATCGGTGAAT GCGGTGGAAA CCATTAGCCG TTTTACAGAC
TTCGATATAC ACTTGTTCCG TCAGGGCAAG CATTTTAAGC TATACGAGAA GCTGGGGTCG
CATGTGATGG AGGTGAATGG GGTAGTAGGG ACTTACTTTG CCGTATGGGC TCCTAATGCT
ACGTATCTGT CGGTAGTCGG GAACTTCAAC GGCTGGAACC ACGGCAGCCA TTCGCTGGCA
CCGCGGTGGG ACAGTTCGGG TATCTGGGAA GGCTGGATTC CGAATGTGGG GGTAGGAGAG
GTTTATAAAT ACTACATTAT ATCCAGCAAC GGACAGCACC TCGAAAAGTC GGACCCGTTT
GCGCTCTGGT GCGAAGTGGC GCCGCGCACG GCTTCCATCG TGTGGGATAC GTGGTACGAA
TGGGAAGACT CGGAATGGAT GAAAGTCCGC AAGGAAAAGA ATAAGCTGAA CGCGCCCATT
TCGGTGTACG AAGTGCATTT GGGCTCCTGG CAGCGCGATC CGTCGGACCC CGAGCGGCAT
CTTACCTATA AAGAAATTGC CGCGAGCCTG GTGCCTTATG TGAAGGAAAT GGGCTTTACG
CACGTGGAGC TGATGCCGAT CATGGAGCAC CCTTACGCGC CGTCGTGGGG CTACCAGATC
ACCGGCTACT TCTCGTGCTC GTCGCGCATG GGTACGCCGC AGGAGCTGAT GTACCTGATC
GACCAGCTGC ACCAGGCGGG CATTGGTGTG TATATGGACT GGGTCCCGTC GCACTTCCCG
GGCGACGCGC ATGGCCTTTT CCGCTTCGAC GGCACATCGC TTTACGAGCA CGAAGACCCG
CGCAAAGGTT ACCATCCCGA CTGGAAAAGT TATATTTTCA ACTACGGCAG AAACGAAGTA
CGCTCGTTTT TGATCAGTAA TGCCATATTC TGGCTCGATC GCTACCATTC CGACGGCTTG
CGCGTAGATG CGGTGGCCTC GATGCTTTAC CTCGACTACT CGCGGAAGCA CGGCGAATGG
ATTCCGAACG AATTCGGCGG TCGCGAAAAT CTCGAAGCGA TCTCGCTGCT GCGCGAAATG
AATGTGGCTG TTTACACCGA ATTCCCGGAT ATTCAGACGA TTGCGGAAGA GTCAACTGCC
TTCCCGGGCG TATCCCGACC GGTTTTTGTA GGCGGACTGG GCTTTGGCAT GAAATGGATG
ATGGGCTGGA TGAACGATAC CTTGAAGTAT TTCGAAAAAG ACCCTTCGTT CCGCAAGTGG
CATCAGGACC AGCTGACTTT CAGTTTGGTA TATGCATTTT CGGAAAACTT CATGCTGCCG
TTCTCGCATG ATGAGGTGGT GTACGGCAAG AAATCGCTCA TTAACAAAAT GCCGGGCGAC
GAATGGCAGA GATTCGCGAA CCTGCGGCTC ATGTTTACCT ACATGTTCAC GCACCCGGGC
ACGAAGCTGA TGTTCATGGG CGGGGAATTT GGACAAACTT CCGAATGGAA CTTCCAGCAA
AGTCTCGACT GGCATTTGCT GGAACACGCG CCGCACAAAG GCATTCGTGA ATGTGTAATT
GCCCTCAACA AGCTGTATCG CGAAGAGCCG GCCTTGTTCG ATTACTCGTT CTCGCACGAT
GGTTTTGAAT GGATCGACAC GCAGGACCGG GAGAATTCGG TGCTCGTGTA CGCCCGCAAA
TCTACCGACC CGGCGCGCAA CGTGATCGTG GCGCTCAACC TGACTCCCGT GCCCAGGAAA
AACTACCGCG TGGGTGTCAT TTCCGAGGGA AGCTGGCAGG AAATATTCAA TTCCGACGCC
GAGGCATTCG GGGGCAGCGG CATCATTAAC TACGACCCGG TGACGGCCGA AAGCCACCAA
TGGCACGGAA AAGCCCATTC GCTGATCCTC GATCTGCCTC CGCTGGGCGC GGTGGTGCTG
AAAAAGGTAG CTCCAACACG AAAATAA
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| Protein sequence | MAKSIGKKKT NATIEPAEDA GTPVAAQSVN AVETISRFTD FDIHLFRQGK HFKLYEKLGS
HVMEVNGVVG TYFAVWAPNA TYLSVVGNFN GWNHGSHSLA PRWDSSGIWE GWIPNVGVGE
VYKYYIISSN GQHLEKSDPF ALWCEVAPRT ASIVWDTWYE WEDSEWMKVR KEKNKLNAPI
SVYEVHLGSW QRDPSDPERH LTYKEIAASL VPYVKEMGFT HVELMPIMEH PYAPSWGYQI
TGYFSCSSRM GTPQELMYLI DQLHQAGIGV YMDWVPSHFP GDAHGLFRFD GTSLYEHEDP
RKGYHPDWKS YIFNYGRNEV RSFLISNAIF WLDRYHSDGL RVDAVASMLY LDYSRKHGEW
IPNEFGGREN LEAISLLREM NVAVYTEFPD IQTIAEESTA FPGVSRPVFV GGLGFGMKWM
MGWMNDTLKY FEKDPSFRKW HQDQLTFSLV YAFSENFMLP FSHDEVVYGK KSLINKMPGD
EWQRFANLRL MFTYMFTHPG TKLMFMGGEF GQTSEWNFQQ SLDWHLLEHA PHKGIRECVI
ALNKLYREEP ALFDYSFSHD GFEWIDTQDR ENSVLVYARK STDPARNVIV ALNLTPVPRK
NYRVGVISEG SWQEIFNSDA EAFGGSGIIN YDPVTAESHQ WHGKAHSLIL DLPPLGAVVL
KKVAPTRK
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