Gene Dfer_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1930 
Symbol 
ID8225501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2363996 
End bp2364490 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content52% 
IMG OID644929769 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003086321 
Protein GI255035700 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.968412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.122067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA GAGAACTGTT ACCCAGCGAT TGGCCTGCGG TCCGGGACAT CTACGCTCAG 
GGAATTGCAA CCGGTCAGGC AACGCTCGAA ACGAGTCCGC CGGAATGGGC GGTGTGGGAT
CAGTCCCATG TGGCTAATCT CCGGTACGTT GCCGTTTCCG ATCATGGCGA AGTGGCGGGC
TGGGCTGCCC TGACACCGGT TTCAGGCCGC TGCGTCTATA CCGGAGTGGC CGAAGTGAGC
ATTTATATAG CCAAAGCTTT CAGAGGGCAG AAAATAGGGG ATCTGCTTTT GAAGCATTTA
ATCATCGAAA GCGAGGGCAA GGGGTACTGG ACATTGCAGG CCGGTATTTT CCCGGAAAAT
CCGGCAAGTA TCAGGCTTCA TGAAAACAAT GGTTTCCGCA TCATCGGCTA CCGTGAGAAA
ATCGGTAAAA TGAAAGGGGC CTGGCGGGAT GTCAATCTGT TGGAACGCAG AAGTAAAATC
ATAGGAATCA ATTAA
 
Protein sequence
MTIRELLPSD WPAVRDIYAQ GIATGQATLE TSPPEWAVWD QSHVANLRYV AVSDHGEVAG 
WAALTPVSGR CVYTGVAEVS IYIAKAFRGQ KIGDLLLKHL IIESEGKGYW TLQAGIFPEN
PASIRLHENN GFRIIGYREK IGKMKGAWRD VNLLERRSKI IGIN